RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA753151" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA753151 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26957810 26957810 PRJNA753151_S_NODE_11142_length_628_cov_4.945299_g9463_i0 PRJNA753151 11142 628 4.945299 31.05647772 Gammaretrovirus murleu 3428959 Viruses Viruses 419 1.1399999999999996e-143   NR 8WUS_E 11801 g9463 i0 96.7 1.9968152866242 209 7 99.8 0 627 1 149 357 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 1254 419 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31475105 31475105 PRJNA753151_S_NODE_20616_length_498_cov_4.013187_g18521_i0 PRJNA753151 20616 498 4.013187 19.98567126 Moloney murine leukemia virus 11801 Viruses Viruses 325 1.4699999999999999e-99   NR NP_057933.2 11801 g18521 i0 98.2 3.97590361445783 165 3 99.4 0 497 3 1130 1294 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1980 325 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;