RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA753112" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA753112 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27179135 27179135 PRJNA753112_P_NODE_6282_length_545_cov_2.989407_g5943_i0 PRJNA753112 6282 545 2.989407 16.29226815 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 208 2.52e-63   NR MDO8336486.1 2026720 g5943 i0 58.9 0.990825688073395 180 70 98 2 1 534 161 338 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 540 208 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30084340 30084340 PRJNA753112_P_NODE_13372_length_371_cov_1.862416_g13030_i0 PRJNA753112 13372 371 1.862416 6.90956336 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 59.7 1.53e-7   NR MDO8336486.1 2026720 g13030 i0 47.1 0.549865229110512 68 25 50.9 2 190 2 7 68 MDO8336486.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 204 59.7 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;