RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA753112" and tax_phylum = "Arthropoda"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA753112 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4557179 4557179 PRJNA753112_P_NODE_11184_length_406_cov_0.936937_g10842_i0 PRJNA753112 11184 406 0.936937 3.80396422 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 103 1.62e-25   NR KAH9399477.1 59818 g10842 i0 43.8 13.5 121 64 86.5 2 29 379 12 132 KAH9399477.1 60S ribosomal protein L22 [Tyrophagus putrescentiae] diamond 5481 103 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Acaridae Tyrophagus Tyrophagus putrescentiae
7107972 7107972 PRJNA753112_P_NODE_7806_length_489_cov_1.959135_g7464_i0 PRJNA753112 7806 489 1.959135 9.58017015 Daphnia sinensis 1820382 Arthropoda Arthropoda 132 9.92e-36   NR KAI9549990.1 1820382 g7464 i0 48.2 3.34969325153374 137 70 83.4 1 473 66 45 181 KAI9549990.1 hypothetical protein GHT06_007518 [Daphnia sinensis] diamond 1638 132 1 Eukaryota Opisthokonta Metazoa Arthropoda Branchiopoda Diplostraca Daphniidae Daphnia Daphnia sinensis
24153100 24153100 PRJNA753112_P_NODE_11339_length_403_cov_2.360606_g10997_i0 PRJNA753112 11339 403 2.360606 9.51324218 Dermatophagoides farinae 6954 Arthropoda Arthropoda 159 1.18e-45   NR XP_046909420.1 6954 g10997 i0 60.2 23.7617866004963 133 42 99 2 5 403 65 186 XP_046909420.1 40S ribosomal protein S2-like [Dermatophagoides farinae] diamond 9576 159 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Sarcoptiformes Pyroglyphidae Dermatophagoides Dermatophagoides farinae
28379307 28379307 PRJNA753112_P_NODE_23146_length_283_cov_1.719048_g22804_i0 PRJNA753112 23146 283 1.719048 4.86490584 Uloborus diversus 327109 Arthropoda Arthropoda 119 1.51e-30   NR XP_054713810.1 327109 g22804 i0 54.7 1.99293286219081 95 42 99.6 1 2 283 80 174 XP_054713810.1 ribosome biogenesis protein BRX1 homolog [Uloborus diversus] diamond 564 119 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Uloboridae Uloborus Uloborus diversus
28726676 28726676 PRJNA753112_P_NODE_9827_length_433_cov_1.733333_g9485_i0 PRJNA753112 9827 433 1.733333 7.50533189 Lepeophtheirus salmonis 72036 Arthropoda Arthropoda 98.6 1.35e-22   NR ADD38186.1 72036 g9485 i0 35.3 0.963048498845266 139 85 96.3 1 429 13 3 136 ADD38186.1 60S ribosomal protein L9 [Lepeophtheirus salmonis] diamond 417 98.6 1 Eukaryota Opisthokonta Metazoa Arthropoda Hexanauplia Siphonostomatoida Caligidae Lepeophtheirus Lepeophtheirus salmonis
30567990 30567990 PRJNA753112_P_NODE_12733_length_379_cov_4.751634_g12391_i0 PRJNA753112 12733 379 4.751634 18.00869286 root 1 Root_unresolved Root_unresolved 46.2 0.00665   NR BAM20583.1 76194 g12391 i0 37.9 1.58311345646438 66 35 47.5 1 241 62 57 122 BAM20583.1 unknown secreted protein, partial [Papilio polytes] diamond 600 46.6 0.991416309012876 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Papilionidae Papilio Papilio polytes

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;