RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA752572" and tax_phylum = "Candidatus Micrarchaeota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Micrarchaeota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA752572 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20327820 20327820 PRJNA752572_P_NODE_179116_length_199_cov_2.219512_g178609_i0 PRJNA752572 179116 199 2.219512 4.41682888 Candidatus Micrarchaeota archaeon 2250274 Archaea Archaea 105 1.68e-24   NR MBU1681720.1 2250274 g178609 i0 82.8 0.874371859296482 58 8 85.9 2 28 198 247 303 MBU1681720.1 methionine--tRNA ligase [Candidatus Micrarchaeota archaeon] diamond 174 105 1 Archaea   Nanobdellati Candidatus Micrarchaeota         Candidatus Micrarchaeota archaeon
27590155 27590155 PRJNA752572_P_NODE_208084_length_184_cov_1.845638_g207577_i0 PRJNA752572 208084 184 1.845638 3.39597392 Candidatus Norongarragalinales archaeon 2886393 Archaea Archaea 96.3 1.89e-21   NR HLC48531.1 2886393 g207577 i0 73.2 2.64130434782609 56 15 91.3 0 170 3 418 473 HLC48531.1 lysine--tRNA ligase [Candidatus Norongarragalinales archaeon] diamond 486 96.3 1 Archaea   Nanobdellati Candidatus Micrarchaeota Candidatus Micrarchaeia Candidatus Norongarragalinales     Candidatus Norongarragalinales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;