RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA752278" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA752278 · 5 ✖

analysis 1

  • diamond · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24954733 24954733 PRJNA752278_P_NODE_80020_length_250_cov_1.536723_g79817_i0 PRJNA752278 80020 250 1.536723 3.8418075 Fidelibacterota bacterium 2026760 Bacteria Bacteria 62 6.4e-9   NR MBT5758053.1 2026760 g79817 i0 58.2 0.66 55 22 66 1 84 248 578 631 MBT5758053.1 hypothetical protein [Fidelibacterota bacterium] diamond 165 62 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
26926246 26926246 PRJNA752278_P_NODE_402_length_1520_cov_4.543193_g307_i0 PRJNA752278 402 1520 4.543193 69.0565336 Fidelibacterota bacterium 2026760 Bacteria Bacteria 343 8.299999999999999e-107   NR MBC8256583.1 2026760 g307 i0 50.4 6.47368421052632 363 159 70.7 11 1147 74 100 446 MBC8256583.1 DUF2817 domain-containing protein [Fidelibacterota bacterium] diamond 9840 343 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30337653 30337653 PRJNA752278_P_NODE_70872_length_257_cov_2.038043_g70669_i0 PRJNA752278 70872 257 2.038043 5.23777051 Fidelibacterota bacterium 2026760 Bacteria Bacteria 54.3 3.9e-6   NR MBC8256768.1 2026760 g70669 i0 84.6 0.303501945525292 26 4 30.4 0 2 79 1130 1155 MBC8256768.1 tandem-95 repeat protein [Fidelibacterota bacterium] diamond 78 54.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30495306 30495306 PRJNA752278_P_NODE_71533_length_257_cov_0.836957_g71330_i0 PRJNA752278 71533 257 0.836957 2.15097949 Fidelibacterota bacterium 2026760 Bacteria Bacteria 45.1 0.00579   NR MAR29744.1 2026760 g71330 i0 52.4 1.49416342412451 42 19 47.9 1 124 2 53 94 MAR29744.1 hypothetical protein [Fidelibacterota bacterium] diamond 384 45.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30599708 30599708 PRJNA752278_P_NODE_22213_length_342_cov_4.695167_g22010_i0 PRJNA752278 22213 342 4.695167 16.05747114 Bacteria 2 Bacteria Bacteria 70.5 1.17e-11   NR MFQ6610072.1 2026760 g22010 i0 51.6 1.64035087719298 62 30 54.4 0 5 190 225 286 MFQ6610072.1 hypothetical protein [Fidelibacterota bacterium] diamond 561 70.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;