RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA752278" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA752278 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30979170 30979170 PRJNA752278_P_NODE_3154_length_689_cov_3.564935_g2961_i0 PRJNA752278 3154 689 3.564935 24.56240215 Bacteria 2 Bacteria Bacteria 101 4.53e-21   NR WP_337291191.1 2032687 g2961 i0 38.5 1.2844702467344 148 84 61.8 4 663 238 237 383 WP_337291191.1 multicopper oxidase domain-containing protein [Candidatus Methylomirabilis sp.] diamond 885 102 0.990196078431373 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales Candidatus Methylomirabilaceae Candidatus Methylomirabilis Candidatus Methylomirabilis sp.
31927618 31927618 PRJNA752278_P_NODE_13697_length_406_cov_0.915916_g13494_i0 PRJNA752278 13697 406 0.915916 3.71861896 Pseudomonadati 3379134 Bacteria Bacteria 45.8 0.00584   NR HEY7250305.1 2072417 g13494 i0 37 1.11576354679803 73 45 53.2 1 365 150 72 144 HEY7250305.1 DUF1772 domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 453 46.2 0.991341991341991 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;