RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA751877" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA751877 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27052873 27052873 PRJNA751877_P_NODE_26662_length_246_cov_0.890173_g26540_i0 PRJNA751877 26662 246 0.890173 2.18982558 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 43.1 0.0289   NR MCW4027024.1 2026714 g26540 i0 43.6 0.475609756097561 39 22 47.6 0 119 3 379 417 MCW4027024.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 117 43.1 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
30747916 30747916 PRJNA751877_P_NODE_27014_length_245_cov_0.895349_g26892_i0 PRJNA751877 27014 245 0.895349 2.19360505 Nitrososphaerota archaeon 2026795 Archaea Archaea 46.6 0.00164   NR MCS4538820.1 2026795 g26892 i0 33.3 0.844897959183673 69 39 78.4 2 45 236 121 187 MCS4538820.1 hypothetical protein [Nitrososphaerota archaeon] diamond 207 46.6 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;