RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA749559" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA749559 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31348474 31348474 PRJNA749559_P_NODE_2516_length_274_cov_1.788732_g2446_i0 PRJNA749559 2516 274 1.788732 4.90112568 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 128 3.89e-32   NR AVM87439.1 3063761 g2446 i0 65.9 0.963503649635037 88 30 96.4 0 270 7 232 319 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 264 128 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
31854350 31854350 PRJNA749559_P_NODE_2797_length_259_cov_2.313131_g2727_i0 PRJNA749559 2797 259 2.313131 5.99100929 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 114 2.1900000000000003e-27   NR AVM87439.1 3063761 g2727 i0 62.4 0.984555984555985 85 32 98.5 0 257 3 102 186 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 255 114 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;