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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA745923" and tax_phylum = "Chordata"

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tax_superkingdom 1

tax_phylum 1

  • Chordata · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745923 · 13 ✖

analysis 1

  • diamond · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26957664 26957664 PRJNA745923_S_NODE_37822_length_153_cov_1.309091_g37490_i0 PRJNA745923 37822 153 1.309091 2.00290923 Prionailurus viverrinus 61388 Chordata Chordata 76.6 4.22e-16   NR XP_047724766.1 61388 g37490 i0 91.7 0.941176470588235 48 4 94.1 0 10 153 1 48 XP_047724766.1 C-type natriuretic peptide-like [Prionailurus viverrinus] diamond 144 76.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Felidae Prionailurus Prionailurus viverrinus
28252865 28252865 PRJNA745923_S_NODE_27386_length_183_cov_2.057143_g27054_i0 PRJNA745923 27386 183 2.057143 3.76457169 Eschrichtius robustus 9764 Chordata Chordata 56.6 2.15e-7   NR KAJ8795343.1 9764 g27054 i0 52.4 1.0327868852459 63 28 100 2 183 1 354 416 KAJ8795343.1 hypothetical protein J1605_018358 [Eschrichtius robustus] diamond 189 56.6 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
28600363 28600363 PRJNA745923_S_NODE_31647_length_169_cov_1.142857_g31315_i0 PRJNA745923 31647 169 1.142857 1.93142833 Mus musculus 10090 Chordata Chordata 42 0.0258   NR NP_032564.1 10090 g31315 i0 92.9 0.994082840236686 56 4 99.4 0 2 169 195 250 NP_032564.1 myristoylated alanine-rich C-kinase substrate [Mus musculus] diamond 168 42 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
29200326 29200326 PRJNA745923_S_NODE_20569_length_216_cov_1.387283_g20237_i0 PRJNA745923 20569 216 1.387283 2.99653128 Phyllostomus discolor 89673 Chordata Chordata 42.7 0.0224   NR KAF6104100.1 89673 g20237 i0 65.5 0.402777777777778 29 10 40.3 0 98 12 174 202 KAF6104100.1 hypothetical protein HJG60_011147 [Phyllostomus discolor] diamond 87 42.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Chiroptera Phyllostomidae Phyllostomus Phyllostomus discolor
30210517 30210517 PRJNA745923_S_NODE_34732_length_160_cov_2.461538_g34400_i0 PRJNA745923 34732 160 2.461538 3.9384608 Gulo gulo 48420 Chordata Chordata 42.4 0.0167   NR VCW98394.1 48420 g34400 i0 77.8 0.675 36 8 67.5 0 159 52 6 41 VCW98394.1 unnamed protein product, partial [Gulo gulo] diamond 108 42.4 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Carnivora Mustelidae Gulo Gulo gulo
30567946 30567946 PRJNA745923_S_NODE_33873_length_163_cov_1.150000_g33541_i0 PRJNA745923 33873 163 1.15 1.8745 Artiodactyla 91561 Chordata Chordata 54.7 4.9e-8   NR KAJ8794086.1 9764 g33541 i0 56 1.82208588957055 50 22 92 0 161 12 35 84 KAJ8794086.1 hypothetical protein J1605_019078 [Eschrichtius robustus] diamond 297 55.1 0.992740471869329 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Eschrichtiidae Eschrichtius Eschrichtius robustus
30811054 30811054 PRJNA745923_S_NODE_13494_length_276_cov_2.566524_g13162_i0 PRJNA745923 13494 276 2.566524 7.08360624 Cervus elaphus 9860 Chordata Chordata 47 0.00173   NR XP_043737882.1 9860 g13162 i0 56.3 0.521739130434783 48 20 51.1 1 192 52 37 84 XP_043737882.1 uncharacterized protein LOC122680493 [Cervus elaphus] diamond 144 47 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Cervus Cervus elaphus
30811055 30811055 PRJNA745923_S_NODE_14234_length_268_cov_1.280000_g13902_i0 PRJNA745923 14234 268 1.28 3.4304 Delphinapterus leucas 9749 Chordata Chordata 44.7 0.0102   NR XP_030618316.1 9749 g13902 i0 66.7 0.335820895522388 30 10 33.6 0 267 178 152 181 XP_030618316.1 LOW QUALITY PROTEIN: cell division control protein 42 homolog [Delphinapterus leucas] diamond 90 44.7 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Monodontidae Delphinapterus Delphinapterus leucas
31980838 31980838 PRJNA745923_S_NODE_39518_length_151_cov_1.194444_g39186_i0 PRJNA745923 39518 151 1.194444 1.80361044 Bubalus bubalis 89462 Chordata Chordata 49.3 4.94e-5   NR XP_044792631.2 89462 g39186 i0 61.8 1.35099337748344 34 13 67.5 0 15 116 24 57 XP_044792631.2 acetylserotonin O-methyltransferase isoform X3 [Bubalus bubalis] diamond 204 49.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Bubalus Bubalus bubalis
32329352 32329352 PRJNA745923_S_NODE_23179_length_201_cov_3.531646_g22847_i0 PRJNA745923 23179 201 3.531646 7.09860846 Rangifer tarandus platyrhynchus 3082113 Chordata Chordata 81.3 5.96e-18   NR CAI9706346.1 3082113 g22847 i0 93.3 0.671641791044776 45 2 67.2 1 170 36 43 86 CAI9706346.1 unnamed protein product, partial [Rangifer tarandus platyrhynchus] diamond 135 81.3 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Cervidae Rangifer Rangifer tarandus
32360912 32360912 PRJNA745923_S_NODE_17719_length_236_cov_0.994819_g17387_i0 PRJNA745923 17719 236 0.994819 2.34777284 Capra hircus 9925 Chordata Chordata 60.1 2.35e-8   NR KAJ1066612.1 9925 g17387 i0 48.3 7.61440677966102 60 31 76.3 0 194 15 270 329 KAJ1066612.1 hypothetical protein K5549_020961, partial [Capra hircus] diamond 1797 60.1 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Bovidae Capra Capra hircus
32434161 32434161 PRJNA745923_S_NODE_18439_length_230_cov_1.754011_g18107_i0 PRJNA745923 18439 230 1.754011 4.0342253 root 1 Root_unresolved Root_unresolved 160 1.0600000000000001e-44   NR XP_030110853.2 10090 g18107 i0 98.7 15.8608695652174 76 1 99.1 0 1 228 150 225 XP_030110853.2 uncharacterized protein Gm42427, partial [Mus musculus] diamond 3648 160 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
32487390 32487390 PRJNA745923_S_NODE_34179_length_162_cov_1.210084_g33847_i0 PRJNA745923 34179 162 1.210084 1.96033608 Sousa chinensis 103600 Chordata Chordata 75.9 2.64e-14   NR TEA35239.1 103600 g33847 i0 92.7 0.759259259259259 41 3 75.9 0 1 123 69 109 TEA35239.1 hypothetical protein DBR06_SOUSAS2810114 [Sousa chinensis] diamond 123 75.9 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Artiodactyla Delphinidae Sousa Sousa chinensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;