RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA745923" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745923 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27442261 27442261 PRJNA745923_S_NODE_13343_length_278_cov_2.251064_g13011_i0 PRJNA745923 13343 278 2.251064 6.25795792 Opisthokonta 33154 Fungi Fungi 43.1 0.0416   NR KAJ3729874.1 153919 g13011 i0 31.5 1.47841726618705 89 49 83.1 2 257 27 94 182 KAJ3729874.1 hypothetical protein C8R42DRAFT_177135 [Lentinula raphanica] diamond 411 43.1 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Omphalotaceae Lentinula Lentinula raphanica
28925817 28925817 PRJNA745923_S_NODE_28968_length_177_cov_2.865672_g28636_i0 PRJNA745923 28968 177 2.865672 5.07223944 Puccinia 5296 Fungi Fungi 41.6 0.0398   NR POW02948.1 27350 g28636 i0 42.9 3.5593220338983 42 24 71.2 0 51 176 1247 1288 POW02948.1 hypothetical protein PSHT_11892 [Puccinia striiformis] diamond 630 41.6 1 Eukaryota Opisthokonta Fungi Basidiomycota Pucciniomycetes Pucciniales Pucciniaceae Puccinia Puccinia striiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;