RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA745923" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745923 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16027161 16027161 PRJNA745923_S_NODE_13373_length_278_cov_1.225532_g13041_i0 PRJNA745923 13373 278 1.225532 3.40697896 Ascochyta rabiei 5454 Fungi Fungi 153 5.88e-41   NR XP_038799022.1 5454 g13041 i0 90.9 0.949640287769784 88 8 95 0 278 15 742 829 XP_038799022.1 Multisite-specific tRNA:(cytosine-C(5))-methyltransferase [Ascochyta rabiei] diamond 264 153 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Didymellaceae Ascochyta Ascochyta rabiei
27716552 27716552 PRJNA745923_S_NODE_35904_length_157_cov_2.701754_g35572_i0 PRJNA745923 35904 157 2.701754 4.24175378 Conoideocrella luteorostrata 1105319 Fungi Fungi 68.2 1.11e-11   NR KAK2590978.1 1105319 g35572 i0 69.2 0.993630573248408 52 15 97.5 1 157 5 182 233 KAK2590978.1 hypothetical protein QQS21_011337 [Conoideocrella luteorostrata] diamond 156 68.2 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Clavicipitaceae Conoideocrella Conoideocrella luteorostrata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;