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contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA745553" and tax_phylum = "Discosea"

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tax_superkingdom 1

tax_phylum 1

  • Discosea · 14 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9652648 9652648 PRJNA745553_S_NODE_21828_length_265_cov_1.203125_g21633_i0 PRJNA745553 21828 265 1.203125 3.18828125 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 119 1.64e-30   NR XP_004338439.1 1257118 g21633 i0 72.4 2.54716981132075 76 20 84.9 1 264 40 229 304 XP_004338439.1 protein phosphatase 6, catalytic subunit isoform a, putative [Acanthamoeba castellanii str. Neff] diamond 675 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
26926186 26926186 PRJNA745553_S_NODE_11342_length_363_cov_6.672414_g11147_i0 PRJNA745553 11342 363 6.672414 24.22086282 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 73.9 1.47e-12   NR XP_004340296.1 1257118 g11147 i0 62.7 0.421487603305785 51 19 42.1 0 113 265 366 416 XP_004340296.1 uncharacterized protein ACA1_370300 [Acanthamoeba castellanii str. Neff] diamond 153 73.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27178978 27178978 PRJNA745553_S_NODE_29382_length_220_cov_4.340136_g29187_i0 PRJNA745553 29382 220 4.340136 9.5482992 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 82.4 1.84e-16   NR XP_004334943.1 1257118 g29187 i0 61 4.11818181818182 59 23 80.5 0 26 202 303 361 XP_004334943.1 uncharacterized protein ACA1_095900 [Acanthamoeba castellanii str. Neff] diamond 906 82.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27274029 27274029 PRJNA745553_S_NODE_203_length_1216_cov_5.200350_g160_i0 PRJNA745553 203 1216 5.20035 63.236256 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 119 5.08e-25   NR XP_004342205.1 1257118 g160 i0 39.1 0.384868421052632 156 70 38.5 3 1133 666 669 799 XP_004342205.1 SAM domain (Sterile alpha motif) domain containing protein [Acanthamoeba castellanii str. Neff] diamond 468 119 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27747941 27747941 PRJNA745553_S_NODE_23144_length_257_cov_2.070652_g22949_i0 PRJNA745553 23144 257 2.070652 5.32157564 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 108 4.3e-25   NR XP_004342121.1 1257118 g22949 i0 51.9 0.945525291828794 81 39 94.6 0 243 1 680 760 XP_004342121.1 PH domain containing protein [Acanthamoeba castellanii str. Neff] diamond 243 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29042462 29042462 PRJNA745553_S_NODE_3528_length_562_cov_3.049080_g3343_i0 PRJNA745553 3528 562 3.04908 17.1358296 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 154 2.62e-41   NR XP_004367792.1 1257118 g3343 i0 49.3 0.790035587188612 148 74 79 1 557 114 172 318 XP_004367792.1 RNA ligase (ATP), putative [Acanthamoeba castellanii str. Neff] diamond 444 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29831600 29831600 PRJNA745553_S_NODE_5731_length_481_cov_2.500000_g5537_i0 PRJNA745553 5731 481 2.5 12.025 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 3.8e-17   NR XP_004339290.1 1257118 g5537 i0 45.3 1.54677754677755 117 62 72.3 2 481 134 202 317 XP_004339290.1 papain family cysteine protease [Acanthamoeba castellanii str. Neff] diamond 744 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30084221 30084221 PRJNA745553_S_NODE_14272_length_326_cov_1.521739_g14077_i0 PRJNA745553 14272 326 1.521739 4.96086914 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 103 1e-23   NR XP_004339984.1 1257118 g14077 i0 69.7 0.607361963190184 66 20 60.7 0 303 106 299 364 XP_004339984.1 uncharacterized protein ACA1_208450 [Acanthamoeba castellanii str. Neff] diamond 198 103 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30558089 30558089 PRJNA745553_S_NODE_6733_length_453_cov_4.342105_g6539_i0 PRJNA745553 6733 453 4.342105 19.66973565 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 189 4.7e-57   NR XP_004338965.1 1257118 g6539 i0 61.8 0.900662251655629 136 52 90.1 0 452 45 142 277 XP_004338965.1 methyltransferase [Acanthamoeba castellanii str. Neff] diamond 408 189 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30716142 30716142 PRJNA745553_S_NODE_13374_length_336_cov_5.231939_g13179_i0 PRJNA745553 13374 336 5.231939 17.57931504 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 88.6 7.38e-20   NR XP_004333881.1 1257118 g13179 i0 46.1 0.794642857142857 89 44 76.8 2 21 278 45 132 XP_004333881.1 Hypothetical protein ACA1_273800 [Acanthamoeba castellanii str. Neff] diamond 267 88.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31380068 31380068 PRJNA745553_S_NODE_10776_length_371_cov_2.395973_g10581_i0 PRJNA745553 10776 371 2.395973 8.88905983 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 98.2 1.59e-22   NR XP_004338209.1 1257118 g10581 i0 42.6 0.986522911051213 122 69 98.7 1 368 3 78 198 XP_004338209.1 eukaryotic translation initiation factor 3 subunit k, putative [Acanthamoeba castellanii str. Neff] diamond 366 98.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32107490 32107490 PRJNA745553_S_NODE_1898_length_663_cov_5.432203_g1731_i0 PRJNA745553 1898 663 5.432203 36.01550589 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 138 2.5099999999999996e-37   NR XP_004336688.1 1257118 g1731 i0 61.3 0.479638009049774 106 41 48 0 542 225 23 128 XP_004336688.1 LIM domain containing protein [Acanthamoeba castellanii str. Neff] diamond 318 138 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32149227 32149227 PRJNA745553_S_NODE_3338_length_571_cov_4.612450_g3155_i0 PRJNA745553 3338 571 4.61245 26.3370895 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 4.24e-24   NR XP_004337284.1 1257118 g3155 i0 55.3 1.88091068301226 94 42 49.4 0 33 314 348 441 XP_004337284.1 Nethylammeline chlorohydrolase [Acanthamoeba castellanii str. Neff] diamond 1074 108 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32455811 32455811 PRJNA745553_S_NODE_4639_length_517_cov_3.819820_g4449_i0 PRJNA745553 4639 517 3.81982 19.7484694 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 234 3.48e-73   NR XP_004340798.1 1257118 g4449 i0 68.9 1.86847195357834 161 49 92.8 1 1 480 222 382 XP_004340798.1 golgi family protein, putative [Acanthamoeba castellanii str. Neff] diamond 966 234 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;