RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA745553" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA745553 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5827761 5827761 PRJNA745553_S_NODE_18365_length_288_cov_3.209302_g18170_i0 PRJNA745553 18365 288 3.209302 9.24278976 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 136 3.07e-36   NR XP_066933787.1 252671 g18170 i0 78.6 0.875 84 18 87.5 0 286 35 311 394 XP_066933787.1 large ribosomal subunit protein uL3-like [Clytia hemisphaerica] diamond 252 136 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
8377762 8377762 PRJNA745553_S_NODE_5667_length_482_cov_8.506112_g5473_i0 PRJNA745553 5667 482 8.506112 40.99945984 root 1 Root_unresolved Root_unresolved 79.3 6.51e-14   NR XP_047123121.1 6087 g5473 i0 58.7 5.39626556016598 92 24 48.5 1 7 240 254 345 XP_047123121.1 calreticulin isoform X2 [Hydra vulgaris] diamond 2601 79.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
10928408 10928408 PRJNA745553_S_NODE_7129_length_443_cov_4.305405_g6935_i0 PRJNA745553 7129 443 4.305405 19.07294415 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 158 1.25e-46   NR XP_057312441.1 13093 g6935 i0 79.8 28.8893905191874 99 19 66.4 1 85 378 35 133 XP_057312441.1 uncharacterized protein LOC130653961 [Hydractinia symbiolongicarpus] diamond 12798 159 0.993710691823899 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
26799509 26799509 PRJNA745553_S_NODE_15101_length_317_cov_2.315574_g14906_i0 PRJNA745553 15101 317 2.315574 7.34036958 Acropora millepora 45264 Cnidaria other_Eukaryota 79 3.69e-16   NR XP_029195141.1 45264 g14906 i0 54.3 6.87066246056782 81 37 76.7 0 315 73 55 135 XP_029195141.1 60S ribosomal protein L14-like [Acropora millepora] diamond 2178 79 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora
29683376 29683376 PRJNA745553_S_NODE_7710_length_429_cov_4.042135_g7515_i0 PRJNA745553 7710 429 4.042135 17.34075915 root 1 Root_unresolved Root_unresolved 117 2.24e-27   NR XP_066918755.1 252671 g7515 i0 56.9 3.94405594405594 116 50 81.1 0 20 367 724 839 XP_066918755.1 major vault protein-like isoform X2 [Clytia hemisphaerica] diamond 1692 117 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
30747887 30747887 PRJNA745553_S_NODE_29794_length_213_cov_4.600000_g29599_i0 PRJNA745553 29794 213 4.6 9.798 Stylophora pistillata 50429 Cnidaria other_Eukaryota 48.5 2.32e-4   NR XP_022790761.1 50429 g29599 i0 59 2.19718309859155 39 16 54.9 0 179 63 2341 2379 XP_022790761.1 supervillin-like isoform X1 [Stylophora pistillata] diamond 468 48.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Stylophora Stylophora pistillata
30905978 30905978 PRJNA745553_S_NODE_17474_length_295_cov_3.509009_g17279_i0 PRJNA745553 17474 295 3.509009 10.35157655 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 46.2 0.00437   NR XP_027046295.1 46731 g17279 i0 54.1 1.49491525423729 37 17 37.6 0 10 120 571 607 XP_027046295.1 uncharacterized protein LOC113674021 [Pocillopora damicornis] diamond 441 46.2 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;