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contig_metadata

23 rows where analysis = "diamond", bioproject = "PRJNA745553" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 23 ✖

tax_kingdom 1

bioproject 1

  • PRJNA745553 · 23 ✖

analysis 1

  • diamond · 23 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4552858 4552858 PRJNA745553_S_NODE_3124_length_581_cov_7.716535_g2941_i0 PRJNA745553 3124 581 7.716535 44.83306835 Chloroflexales bacterium ZM16-3 2496870 Bacteria Bacteria 149 5.1899999999999996e-40   NR NNJ09209.1 2496870 g2941 i0 89.8 0.454388984509466 88 8 44.9 1 549 289 159 246 NNJ09209.1 alpha-ketoacid dehydrogenase subunit beta [Chloroflexales bacterium ZM16-3] diamond 264 149 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium ZM16-3
13477886 13477886 PRJNA745553_S_NODE_14811_length_320_cov_2.008097_g14616_i0 PRJNA745553 14811 320 2.008097 6.4259104 Chloroflexia bacterium 2448782 Bacteria Bacteria 94 1.18e-22   NR MBA3276670.1 2448782 g14616 i0 77.8 1.5 54 11 49.7 1 250 92 3 56 MBA3276670.1 DUF2171 domain-containing protein [Chloroflexia bacterium] diamond 480 94 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
14753261 14753261 PRJNA745553_S_NODE_4212_length_532_cov_8.357298_g4022_i0 PRJNA745553 4212 532 8.357298 44.46082536 Oscillochloris sp. 2547424 Bacteria Bacteria 174 3.04e-50   NR NTV65258.1 2547424 g4022 i0 76 2.20488721804511 129 29 72.7 1 510 124 206 332 NTV65258.1 Hsp70 family protein [Oscillochloris sp.] diamond 1173 174 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Oscillochloridaceae Oscillochloris Oscillochloris sp.
17302220 17302220 PRJNA745553_S_NODE_17334_length_296_cov_7.892377_g17139_i0 PRJNA745553 17334 296 7.892377 23.36143592 Oscillochloris 104175 Bacteria Bacteria 134 1.76e-36   NR MEI8308065.1 2725990 g17139 i0 95.7 4.96621621621622 70 3 70.9 0 274 65 17 86 MEI8308065.1 translation initiation factor IF-3 [Chloroflexales bacterium] diamond 1470 134 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales     Chloroflexales bacterium
26735804 26735804 PRJNA745553_S_NODE_10281_length_378_cov_4.019672_g10086_i0 PRJNA745553 10281 378 4.019672 15.19436016 Chloroflexia bacterium 2448782 Bacteria Bacteria 104 3.0999999999999997e-24   NR MBA3415926.1 2448782 g10086 i0 60.3 0.920634920634921 116 42 92.1 1 350 3 15 126 MBA3415926.1 hypothetical protein [Chloroflexia bacterium] diamond 348 104 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
26863258 26863258 PRJNA745553_S_NODE_11801_length_357_cov_1.760563_g11606_i0 PRJNA745553 11801 357 1.760563 6.28520991 Chloroflexota bacterium 2026724 Bacteria Bacteria 58.2 3.13e-7   NR MEM7343665.1 2026724 g11606 i0 66.1 0.470588235294118 56 15 47.1 3 350 183 171 222 MEM7343665.1 RETICULATA-related protein [Chloroflexota bacterium] diamond 168 58.2 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27115735 27115735 PRJNA745553_S_NODE_6102_length_470_cov_2.198992_g5908_i0 PRJNA745553 6102 470 2.198992 10.3352624 Chloroflexota bacterium 2026724 Bacteria Bacteria 121 4.86e-32   NR MEZ4515128.1 2026724 g5908 i0 48.1 0.823404255319149 129 66 81.7 1 21 404 6 134 MEZ4515128.1 coactosin family protein [Chloroflexota bacterium] diamond 387 121 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
28189528 28189528 PRJNA745553_S_NODE_19086_length_283_cov_1.723810_g18891_i0 PRJNA745553 19086 283 1.72381 4.8783823 Anaerolineaceae bacterium 2024896 Bacteria Bacteria 44.3 0.0104   NR TVR19371.1 2024896 g18891 i0 36.2 0.498233215547703 47 27 49.8 1 169 29 87 130 TVR19371.1 MAG: hypothetical protein EA396_12725 [Anaerolineaceae bacterium] diamond 141 44.3 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales Anaerolineaceae   Anaerolineaceae bacterium
28537308 28537308 PRJNA745553_S_NODE_15247_length_315_cov_5.090909_g15052_i0 PRJNA745553 15247 315 5.090909 16.03636335 Caldilineaceae bacterium 2614250 Bacteria Bacteria 150 8.44e-42   NR HXF64537.1 2614250 g15052 i0 72 1.9047619047619 100 28 95.2 0 12 311 256 355 HXF64537.1 glycosyltransferase family 2 protein [Caldilineaceae bacterium] diamond 600 150 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28915697 28915697 PRJNA745553_S_NODE_21208_length_268_cov_6.251282_g21013_i0 PRJNA745553 21208 268 6.251282 16.75343576 Caldilineaceae bacterium 2614250 Bacteria Bacteria 52.4 1.94e-5   NR MCC6457367.1 2614250 g21013 i0 52.5 0.682835820895522 61 17 68.3 3 207 25 100 148 MCC6457367.1 SH3 domain-containing protein [Caldilineaceae bacterium] diamond 183 52.4 1 Bacteria   Bacillati Chloroflexota Caldilineae Caldilineales Caldilineaceae   Caldilineaceae bacterium
28925809 28925809 PRJNA745553_S_NODE_13788_length_331_cov_3.662791_g13593_i0 PRJNA745553 13788 331 3.662791 12.12383821 Oscillochloris 104175 Bacteria Bacteria 104 4.8199999999999996e-24   NR NTW01167.1 2547424 g13593 i0 66.7 1.41389728096677 78 26 70.7 0 327 94 1 78 NTW01167.1 response regulator [Oscillochloris sp.] diamond 468 104 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Oscillochloridaceae Oscillochloris Oscillochloris sp.
28957708 28957708 PRJNA745553_S_NODE_15008_length_318_cov_1.889796_g14813_i0 PRJNA745553 15008 318 1.889796 6.00955128 Oscillochloris 104175 Bacteria Bacteria 68.6 7.98e-11   NR NTV99706.1 2547424 g14813 i0 47.6 1.18867924528302 63 33 59.4 0 1 189 219 281 NTV99706.1 hypothetical protein [Oscillochloris sp.] diamond 378 68.9 0.995645863570392 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Oscillochloridaceae Oscillochloris Oscillochloris sp.
29263066 29263066 PRJNA745553_S_NODE_20209_length_275_cov_2.277228_g20014_i0 PRJNA745553 20209 275 2.277228 6.262377 Dehalococcoidia bacterium 2026734 Bacteria Bacteria 101 5.579999999999999e-23   NR HZP57668.1 2026734 g20014 i0 50.5 0.992727272727273 91 45 99.3 0 273 1 302 392 HZP57668.1 zinc-dependent alcohol dehydrogenase [Dehalococcoidia bacterium] diamond 273 101 1 Bacteria   Bacillati Chloroflexota Dehalococcoidia       Dehalococcoidia bacterium
30147257 30147257 PRJNA745553_S_NODE_16952_length_300_cov_1.691630_g16757_i0 PRJNA745553 16952 300 1.69163 5.07489 Candidatus Viridilinea mediisalina 2024553 Bacteria Bacteria 43.9 0.00269   NR PDW02046.1 2024553 g16757 i0 59.5 0.37 37 14 36 1 155 262 5 41 PDW02046.1 hypothetical protein CJ255_16055 [Candidatus Viridilinea mediisalina] diamond 111 43.9 1 Bacteria   Bacillati Chloroflexota Chloroflexia Chloroflexales Oscillochloridaceae Candidatus Viridilinea Candidatus Viridilinea mediisalina
30337558 30337558 PRJNA745553_S_NODE_12972_length_341_cov_7.130597_g12777_i0 PRJNA745553 12972 341 7.130597 24.31533577 Candidatus Chloroheliales bacterium 3139183 Bacteria Bacteria 149 4.71e-43   NR PZR97096.1 3139183 g12777 i0 64 1.00293255131965 114 38 97.7 2 2 334 7 120 PZR97096.1 MAG: GNAT family N-acetyltransferase [Candidatus Chloroheliales bacterium] diamond 342 149 1 Bacteria   Bacillati Chloroflexota Chloroflexia Candidatus Chloroheliales     Candidatus Chloroheliales bacterium
30369182 30369182 PRJNA745553_S_NODE_3452_length_565_cov_4.743902_g3268_i0 PRJNA745553 3452 565 4.743902 26.8030463 Anaerolineales bacterium 2073117 Bacteria Bacteria 121 3.01e-30   NR HET9588757.1 2073117 g3268 i0 63.8 0.945132743362832 94 30 47.8 1 284 15 4 97 HET9588757.1 hypothetical protein [Anaerolineales bacterium] diamond 534 121 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium
30526627 30526627 PRJNA745553_S_NODE_14913_length_319_cov_2.008130_g14718_i0 PRJNA745553 14913 319 2.00813 6.4059347 Candidatus Limnocylindria bacterium 3047546 Bacteria Bacteria 105 4.78e-27   NR HTH47464.1 3047546 g14718 i0 65.1 0.780564263322884 83 26 75.2 1 65 304 22 104 HTH47464.1 hypothetical protein [Candidatus Limnocylindria bacterium] diamond 249 105 1 Bacteria   Bacillati Chloroflexota Candidatus Limnocylindria       Candidatus Limnocylindria bacterium
30684526 30684526 PRJNA745553_S_NODE_21553_length_266_cov_4.870466_g21358_i0 PRJNA745553 21553 266 4.870466 12.95543956 Chloroflexota bacterium 2026724 Bacteria Bacteria 43.1 0.0138   NR MBI4791091.1 2026724 g21358 i0 41.8 0.620300751879699 55 27 62 1 225 61 23 72 MBI4791091.1 RrF2 family transcriptional regulator [Chloroflexota bacterium] diamond 165 43.1 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
30726158 30726158 PRJNA745553_S_NODE_874_length_800_cov_4.305365_g763_i0 PRJNA745553 874 800 4.305365 34.44292 Chloroflexota 200795 Bacteria Bacteria 183 1.96e-50   NR MBV9688775.1 2740538 g763 i0 55.4 2.77125 193 75 72.4 4 12 590 268 449 MBV9688775.1 hypothetical protein [Ktedonobacteraceae bacterium] diamond 2217 183 1 Bacteria   Bacillati Chloroflexota Ktedonobacteria Ktedonobacterales Ktedonobacteraceae   Ktedonobacteraceae bacterium
30811050 30811050 PRJNA745553_S_NODE_6174_length_468_cov_1.364557_g5980_i0 PRJNA745553 6174 468 1.364557 6.38612676 Anaerolineae bacterium 2052143 Bacteria Bacteria 89.4 1.87e-19   NR MCL6509833.1 2052143 g5980 i0 51.2 0.538461538461538 84 41 53.8 0 466 215 42 125 MCL6509833.1 single-stranded DNA-binding protein [Anaerolineae bacterium] diamond 252 89.4 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium
31032477 31032477 PRJNA745553_S_NODE_7695_length_429_cov_6.637640_g7500_i0 PRJNA745553 7695 429 6.63764 28.4754756 Chloroflexia bacterium 2448782 Bacteria Bacteria 216 2.32e-64   NR MBA3415581.1 2448782 g7500 i0 71.4 0.979020979020979 140 40 97.9 0 427 8 166 305 MBA3415581.1 peptide ABC transporter substrate-binding protein [Chloroflexia bacterium] diamond 420 216 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium
31105232 31105232 PRJNA745553_S_NODE_19735_length_278_cov_5.468293_g19540_i0 PRJNA745553 19735 278 5.468293 15.20185454 Bacillati 1783272 Bacteria Bacteria 135 1.44e-38   NR MBC8446561.1 2026724 g19540 i0 73.9 1.89928057553957 88 23 95 0 265 2 27 114 MBC8446561.1 IS1 family transposase [Chloroflexota bacterium] diamond 528 135 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31189822 31189822 PRJNA745553_S_NODE_22315_length_262_cov_1.587302_g22120_i0 PRJNA745553 22315 262 1.587302 4.15873124 Chloroflexia bacterium 2448782 Bacteria Bacteria 40.4 0.0445   NR MBA2521223.1 2448782 g22120 i0 32 0.572519083969466 50 34 57.3 0 15 164 5 54 MBA2521223.1 hypothetical protein [Chloroflexia bacterium] diamond 150 40.4 1 Bacteria   Bacillati Chloroflexota Chloroflexia       Chloroflexia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;