RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA745553" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA745553 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28610247 28610247 PRJNA745553_S_NODE_27427_length_236_cov_8.926380_g27232_i0 PRJNA745553 27427 236 8.92638 21.0662568 Bacteria 2 Bacteria Bacteria 55.8 2.64e-8   NR TWP16668.1 713054 g27232 i0 70.7 2.00847457627119 41 12 52.1 0 145 23 3 43 TWP16668.1 hypothetical protein EUA72_00305 [TM7 phylum sp. oral taxon 352] diamond 474 56.2 0.99288256227758 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 352
32497360 32497360 PRJNA745553_S_NODE_5159_length_499_cov_3.124413_g4965_i0 PRJNA745553 5159 499 3.124413 15.59082087 Bacteria 2 Bacteria Bacteria 46.6 0.0011   NR TWP16668.1 713054 g4965 i0 59.5 0.961923847695391 42 17 25.3 0 374 499 2 43 TWP16668.1 hypothetical protein EUA72_00305 [TM7 phylum sp. oral taxon 352] diamond 480 46.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 352

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;