RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA744060" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA744060 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26641129 26641129 PRJNA744060_P_NODE_28641_length_305_cov_1.771552_g28312_i0 PRJNA744060 28641 305 1.771552 5.4032336 Thermoplasmata archaeon 1906666 Archaea Archaea 64.3 1.98e-9   NR UCE36149.1 1906666 g28312 i0 46 1.22950819672131 63 33 62 1 191 3 238 299 UCE36149.1 MAG: hypothetical protein JSW00_11420 [Thermoplasmata archaeon] diamond 375 64.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
27021112 27021112 PRJNA744060_P_NODE_51022_length_242_cov_1.775148_g50693_i0 PRJNA744060 51022 242 1.775148 4.29585816 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47.4 8.71e-4   NR MEL0267202.1 2163009 g50693 i0 26.9 1.89669421487603 78 54 93 1 17 241 372 449 MEL0267202.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 459 47.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
30084163 30084163 PRJNA744060_P_NODE_26892_length_314_cov_1.763485_g26563_i0 PRJNA744060 26892 314 1.763485 5.5373429 Thermoplasmata archaeon 1906666 Archaea Archaea 51.2 6.85e-5   NR MEM4728455.1 1906666 g26563 i0 40.3 1.29936305732484 62 36 59.2 1 312 127 174 234 MEM4728455.1 PAC2 family protein [Thermoplasmata archaeon] diamond 408 51.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;