RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA744060" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA744060 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28726520 28726520 PRJNA744060_P_NODE_51307_length_242_cov_0.923077_g50978_i0 PRJNA744060 51307 242 0.923077 2.23384634 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 81.6 1.15e-16   NR MEJ0072953.1 2026720 g50978 i0 38.8 3.9297520661157 80 49 99.2 0 240 1 126 205 MEJ0072953.1 alanine--tRNA ligase-related protein [Candidatus Saccharibacteria bacterium] diamond 951 81.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
30147206 30147206 PRJNA744060_P_NODE_36832_length_273_cov_1.400000_g36503_i0 PRJNA744060 36832 273 1.4 3.822 Candidatus Saccharibacteria bacterium 32-49-12 1970479 Bacteria Bacteria 113 1.08e-29   NR OYX41100.1 1970479 g36503 i0 70.4 0.89010989010989 81 24 89 0 271 29 7 87 OYX41100.1 MAG: hypothetical protein B7Y94_05545, partial [Candidatus Saccharibacteria bacterium 32-49-12] diamond 243 113 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium 32-49-12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;