contig_metadata
2 rows where analysis = "diamond", bioproject = "PRJNA744060" and tax_phylum = "Candidatus Peregrinibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29704857 | 29704857 | PRJNA744060_P_NODE_50870_length_242_cov_2.502959_g50541_i0 | PRJNA744060 | 50870 | 242 | 2.502959 | 6.05716078 | Candidatus Peregrinibacteria bacterium Greene | 2030811 | Bacteria | Bacteria | 52 | 1.61e-5 | NR | TSC59073.1 | 2017154 | g50541 | i0 | 39 | 0.954545454545455 | 77 | 47 | 95.5 | 0 | 5 | 235 | 145 | 221 | TSC59073.1 MAG: hypothetical protein Greene041619_95 [Candidatus Peregrinibacteria bacterium Greene0416_19] | diamond | 231 | 52 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peregrinibacteria bacterium Greene0416_19 | ||||||
| 32707962 | 32707962 | PRJNA744060_P_NODE_52980_length_234_cov_2.204969_g52651_i0 | PRJNA744060 | 52980 | 234 | 2.204969 | 5.15962746 | Candidatus Peregrinibacteria bacterium | 2030811 | Bacteria | Bacteria | 58.5 | 8.99e-8 | NR | MBI5415102.1 | 2030811 | g52651 | i0 | 48.1 | 0.692307692307692 | 54 | 28 | 69.2 | 0 | 231 | 70 | 446 | 499 | MBI5415102.1 amidophosphoribosyltransferase [Candidatus Peregrinibacteria bacterium] | diamond | 162 | 58.5 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peregrinibacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;