contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA743294" and tax_phylum = "Tubulinea"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 25424903 | 25424903 | PRJNA743294_P_NODE_15260_length_411_cov_1.399408_g14804_i0 | PRJNA743294 | 15260 | 411 | 1.399408 | 5.75156688 | Vermamoeba vermiformis | 5778 | Tubulinea | other_Eukaryota | 221 | 6.03e-68 | NR | AOW71839.1 | 5778 | g14804 | i0 | 91.9 | 0.897810218978102 | 123 | 10 | 89.8 | 0 | 1 | 369 | 291 | 413 | AOW71839.1 bacterial recombinase A [Vermamoeba vermiformis] | diamond | 369 | 221 | 1 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 26672401 | 26672401 | PRJNA743294_P_NODE_10441_length_490_cov_2.119904_g9985_i0 | PRJNA743294 | 10441 | 490 | 2.119904 | 10.3875296 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 215 | 7.19e-62 | NR | AKN09691.1 | 5775 | g9985 | i0 | 63.6 | 0.991836734693878 | 162 | 57 | 98.6 | 2 | 1 | 483 | 741 | 901 | AKN09691.1 Tom70 [Amoeba proteus] | diamond | 486 | 215 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 27652990 | 27652990 | PRJNA743294_P_NODE_14324_length_423_cov_1.485714_g13868_i0 | PRJNA743294 | 14324 | 423 | 1.485714 | 6.28457022 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 139 | 6.22e-35 | NR | AKN09691.1 | 5775 | g13868 | i0 | 47.8 | 0.964539007092199 | 136 | 71 | 96.5 | 0 | 411 | 4 | 459 | 594 | AKN09691.1 Tom70 [Amoeba proteus] | diamond | 408 | 139 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 27842131 | 27842131 | PRJNA743294_P_NODE_30684_length_301_cov_1.368421_g30228_i0 | PRJNA743294 | 30684 | 301 | 1.368421 | 4.11894721 | Amoeba proteus | 5775 | Tubulinea | other_Eukaryota | 171 | 1.25e-50 | NR | AKN09692.1 | 5775 | g30228 | i0 | 78.8 | 0.98671096345515 | 99 | 21 | 98.7 | 0 | 299 | 3 | 103 | 201 | AKN09692.1 Tom40 [Amoeba proteus] | diamond | 297 | 171 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Euamoebida | Amoebidae | Amoeba | Amoeba proteus | ||
| 28704987 | 28704987 | PRJNA743294_P_NODE_47027_length_252_cov_1.307263_g46571_i0 | PRJNA743294 | 47027 | 252 | 1.307263 | 3.29430276 | root | 1 | Root_unresolved | Root_unresolved | 106 | 2.04e-25 | NR | ABD46601.1 | 5778 | g46571 | i0 | 54.8 | 3.95238095238095 | 84 | 36 | 97.6 | 2 | 250 | 5 | 13 | 96 | ABD46601.1 oxidoreductase, partial [Vermamoeba vermiformis] | diamond | 996 | 107 | 0.990654205607477 | Eukaryota | Amoebozoa | Tubulinea | Echinamoebida | Vermamoeba | Vermamoeba vermiformis | ||||
| 32434118 | 32434118 | PRJNA743294_P_NODE_36999_length_278_cov_1.282927_g36543_i0 | PRJNA743294 | 36999 | 278 | 1.282927 | 3.56653706 | Arcellinida | 318493 | Tubulinea | other_Eukaryota | 149 | 2.0399999999999998e-43 | NR | AFX73089.1 | 497998 | g36543 | i0 | 73.6 | 4.93165467625899 | 91 | 24 | 98.2 | 0 | 278 | 6 | 14 | 104 | AFX73089.1 elongation factor 2 alpha, partial [Arcella hemisphaerica] | diamond | 1371 | 149 | 1 | Eukaryota | Amoebozoa | Tubulinea | Elardia | Arcellinida | Arcellidae | Arcella | Arcella hemisphaerica |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;