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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA743294" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA743294 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28862606 28862606 PRJNA743294_P_NODE_13148_length_440_cov_2.994550_g12692_i0 PRJNA743294 13148 440 2.99455 13.17602 Thermoproteus 2270 Archaea Archaea 45.8 0.0156   NR MCD6490725.1 2056631 g12692 i0 41.3 0.634090909090909 46 27 31.4 0 141 4 124 169 MCD6490725.1 DUF3782 domain-containing protein [Thermoproteota archaeon] diamond 279 46.2 0.991341991341991 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
29610113 29610113 PRJNA743294_P_NODE_43090_length_260_cov_2.652406_g42634_i0 PRJNA743294 43090 260 2.652406 6.8962556 Thermoprotei archaeon 2250277 Archaea Archaea 102 1.4999999999999998e-24   NR RLE57769.1 2250277 g42634 i0 59 0.9 78 32 90 0 22 255 8 85 RLE57769.1 MAG: proteasome endopeptidase complex, archaeal, alpha subunit [Thermoprotei archaeon] diamond 234 102 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
30557957 30557957 PRJNA743294_P_NODE_45693_length_254_cov_1.657459_g45237_i0 PRJNA743294 45693 254 1.657459 4.20994586 Caldisphaera sp. 2060322 Archaea Archaea 45.4 0.0048   NR WP_292319306.1 2060322 g45237 i0 35.1 2.59842519685039 74 47 86.2 1 4 222 40 113 WP_292319306.1 heavy metal translocating P-type ATPase [Caldisphaera sp.] diamond 660 45.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Caldisphaeraceae Caldisphaera Caldisphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;