RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "diamond", bioproject = "PRJNA743294" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA743294 · 5 ✖

analysis 1

  • diamond · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26609215 26609215 PRJNA743294_P_NODE_4201_length_740_cov_3.913043_g3794_i0 PRJNA743294 4201 740 3.913043 28.9565182 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 137 5.86e-35   NR MDE2059414.1 2072417 g3794 i0 41.2 0.916216216216216 226 117 88.4 6 1 654 23 240 MDE2059414.1 NAD-dependent epimerase/dehydratase family protein [Candidatus Methylomirabilota bacterium] diamond 678 137 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27084320 27084320 PRJNA743294_P_NODE_55102_length_243_cov_1.594118_g54646_i0 PRJNA743294 55102 243 1.594118 3.87370674 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.9 0.0141   NR HLC41917.1 2072417 g54646 i0 37.2 0.962962962962963 78 45 91.4 2 234 13 209 286 HLC41917.1 recombinase family protein [Candidatus Methylomirabilota bacterium] diamond 234 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27178814 27178814 PRJNA743294_P_NODE_1542_length_1133_cov_16.982075_g1296_i0 PRJNA743294 1542 1133 16.982075 192.40690975 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 204 1.09e-58   NR MBI3988492.1 2072417 g1296 i0 56.6 0.524271844660194 198 84 52.4 1 1082 489 1 196 MBI3988492.1 zinc-binding alcohol dehydrogenase family protein [Candidatus Methylomirabilota bacterium] diamond 594 204 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28694996 28694996 PRJNA743294_P_NODE_12827_length_445_cov_1.895161_g12371_i0 PRJNA743294 12827 445 1.895161 8.43346645 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 104 4.289999999999999e-23   NR HEX9820508.1 2072417 g12371 i0 49.5 4.58426966292135 111 52 74.2 2 380 51 184 291 HEX9820508.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 2040 104 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
29651720 29651720 PRJNA743294_P_NODE_51890_length_247_cov_0.896552_g51434_i0 PRJNA743294 51890 247 0.896552 2.21448344 Pseudomonadati 3379134 Bacteria Bacteria 76.6 2.31e-15   NR HEU5321632.1 2072417 g51434 i0 58.3 2.61133603238866 72 30 87.4 0 27 242 6 77 HEU5321632.1 hypothetical protein [Candidatus Methylomirabilota bacterium] diamond 645 76.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;