RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

14 rows where analysis = "diamond", bioproject = "PRJNA743294" and tax_kingdom = "Thermoproteati"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 14 ✖

bioproject 1

  • PRJNA743294 · 14 ✖

analysis 1

  • diamond · 14 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15226850 15226850 PRJNA743294_P_NODE_19072_length_371_cov_1.302013_g18616_i0 PRJNA743294 19072 371 1.302013 4.83046823 root 1 Root_unresolved Root_unresolved 79 5.1e-15   NR MCW4049482.1 2026714 g18616 i0 39.8 2.81401617250674 113 48 91.4 3 339 1 28 120 MCW4049482.1 FAD-dependent oxidoreductase [Candidatus Bathyarchaeota archaeon] diamond 1044 79 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
27842168 27842168 PRJNA743294_P_NODE_9524_length_511_cov_2.141553_g9068_i0 PRJNA743294 9524 511 2.141553 10.94333583 Nitrososphaerota archaeon 2026795 Archaea Archaea 57 1.25e-6   NR MEM3062687.1 2026795 g9068 i0 37.8 0.575342465753425 98 52 53.4 3 311 39 24 119 MEM3062687.1 putative dsRNA-binding protein [Nitrososphaerota archaeon] diamond 294 57 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
28094933 28094933 PRJNA743294_P_NODE_55685_length_243_cov_0.917647_g55229_i0 PRJNA743294 55685 243 0.917647 2.22988221 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 68.2 4.03e-11   NR RJS87829.1 2026714 g55229 i0 44.4 0.888888888888889 72 34 88.9 1 27 242 547 612 RJS87829.1 MAG: hypothetical protein CW704_01595 [Candidatus Bathyarchaeota archaeon] diamond 216 68.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28673368 28673368 PRJNA743294_P_NODE_31727_length_296_cov_2.188341_g31271_i0 PRJNA743294 31727 296 2.188341 6.47748936 Archaea 2157 Archaea Archaea 47.4 0.00164   NR MCJ7760512.1 2026714 g31271 i0 54.3 1.28716216216216 46 16 41.6 1 171 293 196 241 MCJ7760512.1 beta-propeller domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 381 47.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
28862606 28862606 PRJNA743294_P_NODE_13148_length_440_cov_2.994550_g12692_i0 PRJNA743294 13148 440 2.99455 13.17602 Thermoproteus 2270 Archaea Archaea 45.8 0.0156   NR MCD6490725.1 2056631 g12692 i0 41.3 0.634090909090909 46 27 31.4 0 141 4 124 169 MCD6490725.1 DUF3782 domain-containing protein [Thermoproteota archaeon] diamond 279 46.2 0.991341991341991 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
29042317 29042317 PRJNA743294_P_NODE_49408_length_249_cov_1.965909_g48952_i0 PRJNA743294 49408 249 1.965909 4.8951134100000004 Nitrosopumilus sp. 2024843 Archaea Archaea 71.2 6.47e-13   NR MBA3284293.1 2024843 g48952 i0 45.3 0.903614457831325 75 39 90.4 1 3 227 130 202 MBA3284293.1 class I SAM-dependent methyltransferase [Nitrosopumilus sp.] diamond 225 71.2 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
29210168 29210168 PRJNA743294_P_NODE_20889_length_356_cov_2.890459_g20433_i0 PRJNA743294 20889 356 2.890459 10.29003404 root 1 Root_unresolved Root_unresolved 111 5.81e-28   NR MCW4050692.1 2026714 g20433 i0 59 3.47191011235955 83 34 69.9 0 106 354 82 164 MCW4050692.1 glycoside hydrolase family 5 protein [Candidatus Bathyarchaeota archaeon] diamond 1236 111 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29610113 29610113 PRJNA743294_P_NODE_43090_length_260_cov_2.652406_g42634_i0 PRJNA743294 43090 260 2.652406 6.8962556 Thermoprotei archaeon 2250277 Archaea Archaea 102 1.4999999999999998e-24   NR RLE57769.1 2250277 g42634 i0 59 0.9 78 32 90 0 22 255 8 85 RLE57769.1 MAG: proteasome endopeptidase complex, archaeal, alpha subunit [Thermoprotei archaeon] diamond 234 102 1 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
30557957 30557957 PRJNA743294_P_NODE_45693_length_254_cov_1.657459_g45237_i0 PRJNA743294 45693 254 1.657459 4.20994586 Caldisphaera sp. 2060322 Archaea Archaea 45.4 0.0048   NR WP_292319306.1 2060322 g45237 i0 35.1 2.59842519685039 74 47 86.2 1 4 222 40 113 WP_292319306.1 heavy metal translocating P-type ATPase [Caldisphaera sp.] diamond 660 45.4 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Acidilobales Caldisphaeraceae Caldisphaera Caldisphaera sp.
30810928 30810928 PRJNA743294_P_NODE_32094_length_295_cov_1.387387_g31638_i0 PRJNA743294 32094 295 1.387387 4.09279165 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 57.4 3.58e-7   NR TMI20456.1 2026714 g31638 i0 40.8 0.996610169491525 98 49 93.6 4 295 20 166 260 TMI20456.1 MAG: hypothetical protein E6H36_12920 [Candidatus Bathyarchaeota archaeon] diamond 294 57.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
31348343 31348343 PRJNA743294_P_NODE_52856_length_246_cov_0.901734_g52400_i0 PRJNA743294 52856 246 0.901734 2.21826564 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 65.9 8.34e-11   NR HYW33716.1 3045160 g52400 i0 44.7 0.926829268292683 76 42 92.7 0 18 245 94 169 HYW33716.1 DsbA family oxidoreductase [Candidatus Bathyarchaeia archaeon] diamond 228 65.9 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
31411529 31411529 PRJNA743294_P_NODE_59476_length_227_cov_3.863636_g59020_i0 PRJNA743294 59476 227 3.863636 8.77045372 Nitrosopumilus sp. 2024843 Archaea Archaea 44.3 0.00544   NR MBT8252157.1 2024843 g59020 i0 43.5 0.819383259911894 62 21 81.9 2 6 191 93 140 MBT8252157.1 hypothetical protein [Nitrosopumilus sp.] diamond 186 44.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
31664317 31664317 PRJNA743294_P_NODE_12457_length_451_cov_2.854497_g12001_i0 PRJNA743294 12457 451 2.854497 12.87378147 Nitrosopumilus sp. 2024843 Archaea Archaea 99.4 2.48e-21   NR MDA7940732.1 2024843 g12001 i0 68.4 2.04878048780488 57 18 37.9 0 270 100 343 399 MDA7940732.1 multicopper oxidase domain-containing protein [Nitrosopumilus sp.] diamond 924 99.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.
32170926 32170926 PRJNA743294_P_NODE_9958_length_501_cov_1.640187_g9502_i0 PRJNA743294 9958 501 1.640187 8.21733687 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 201 1.14e-59   NR HVD36003.1 2169593 g9502 i0 59.4 2.95209580838323 165 67 98.8 0 498 4 9 173 HVD36003.1 ammonium transporter [Nitrososphaeraceae archaeon] diamond 1479 201 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;