RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA741997" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27084235 27084235 PRJNA741997_P_NODE_67402_length_261_cov_1.218085_g66282_i0 PRJNA741997 67402 261 1.218085 3.17920185 Rubrivirga sp. IMCC452 1885344 Bacteria Bacteria 61.6 9.95e-9   NR WP_412063005.1 3391614 g66282 i0 73 1.81609195402299 37 10 42.5 0 8 118 169 205 WP_412063005.1 hypothetical protein [Rubrivirga sp. IMCC45206] diamond 474 61.6 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae Rubrivirga Rubrivirga sp. IMCC45206
27947101 27947101 PRJNA741997_P_NODE_44685_length_324_cov_2.625498_g43565_i0 PRJNA741997 44685 324 2.625498 8.50661352 Pseudomonadati 3379134 Bacteria Bacteria 115 2.0500000000000003e-27   NR NND72019.1 2306054 g43565 i0 63.9 4.62962962962963 83 30 76.9 0 72 320 8 90 NND72019.1 bifunctional sulfate adenylyltransferase/adenylylsulfate kinase [Rhodothermales bacterium] diamond 1500 116 0.991379310344828 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;