RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA741997" and tax_phylum = "Entoprocta"

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tax_superkingdom 1

tax_phylum 1

  • Entoprocta · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4549996 4549996 PRJNA741997_P_NODE_47224_length_315_cov_1.272727_g46104_i0 PRJNA741997 47224 315 1.272727 4.00909005 Barentsia elongata 478378 Entoprocta other_Eukaryota 162 3.13e-48   NR ABW90393.1 478378 g46104 i0 72.1 50.7619047619048 104 29 99 0 312 1 7 110 ABW90393.1 putative ribosomal protein L13a, partial [Barentsia elongata] diamond 15990 162 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata
17299750 17299750 PRJNA741997_P_NODE_70654_length_253_cov_1.283333_g69534_i0 PRJNA741997 70654 253 1.283333 3.24683249 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 1.13e-26   NR ABW90414.1 478378 g69534 i0 63.3 11.2173913043478 79 29 93.7 0 252 16 175 253 ABW90414.1 putative ribosomal protein S4, partial [Barentsia elongata] diamond 2838 108 1 Eukaryota Opisthokonta Metazoa Entoprocta     Barentsiidae Barentsia Barentsia elongata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;