RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA741997" and tax_phylum = "Candidatus Latescibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Latescibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA741997 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30052345 30052345 PRJNA741997_P_NODE_10951_length_762_cov_2.213353_g9934_i0 PRJNA741997 10951 762 2.213353 16.86574986 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 76.3 1.15e-12   NR MDP6037746.1 2053570 g9934 i0 34.1 2.79133858267717 182 85 71.7 7 174 719 1 147 MDP6037746.1 thiopurine S-methyltransferase [Candidatus Latescibacterota bacterium] diamond 2127 76.3 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
31949014 31949014 PRJNA741997_P_NODE_87457_length_242_cov_0.911243_g86337_i0 PRJNA741997 87457 242 0.911243 2.20520806 Candidatus Latescibacterota bacterium 2053570 Bacteria Bacteria 94.4 1.98e-20   NR UCE02019.1 2053570 g86337 i0 56.3 2.98760330578512 80 32 97.9 2 239 3 196 273 UCE02019.1 MAG: hypothetical protein JSW67_12250 [Candidatus Latescibacterota bacterium] diamond 723 94.4 1 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium
32686244 32686244 PRJNA741997_P_NODE_87420_length_242_cov_0.911243_g86300_i0 PRJNA741997 87420 242 0.911243 2.20520806 Bacteria 2 Bacteria Bacteria 83.6 1.52e-16   NR NKB70912.1 2053570 g86300 i0 48.1 4.72314049586777 77 40 95.5 0 234 4 316 392 NKB70912.1 DUF4832 domain-containing protein [Candidatus Latescibacterota bacterium] diamond 1143 84 0.995238095238095 Bacteria FCB group Pseudomonadati Candidatus Latescibacterota         Candidatus Latescibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;