RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA741997" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA741997 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26672358 26672358 PRJNA741997_P_NODE_50581_length_303_cov_1.339130_g49461_i0 PRJNA741997 50581 303 1.33913 4.0575639 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 50.8 1.09e-4   NR MCF7812026.1 2044595 g49461 i0 35.6 0.722772277227723 73 43 72.3 2 5 223 456 524 MCF7812026.1 DUF4215 domain-containing protein [Candidatus Altimarinota bacterium] diamond 219 50.8 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
29073781 29073781 PRJNA741997_P_NODE_22148_length_481_cov_1.078431_g21030_i0 PRJNA741997 22148 481 1.078431 5.18725311 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 66.2 3.18e-9   NR MDD3067198.1 2044595 g21030 i0 33.3 0.823284823284823 132 83 80.5 2 469 83 300 429 MDD3067198.1 FG-GAP repeat protein [Candidatus Altimarinota bacterium] diamond 396 66.2 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;