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contig_metadata

12 rows where analysis = "diamond", bioproject = "PRJNA738523" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 12 ✖

tax_clade 1

bioproject 1

  • PRJNA738523 · 12 ✖

analysis 1

  • diamond · 12 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3270924 3270924 PRJNA738523_P_NODE_8783_length_266_cov_2.233161_g8712_i0 PRJNA738523 8783 266 2.233161 5.94020826 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 106 1.4900000000000002e-27   NR XP_022591918.1 88456 g8712 i0 60.2 6.86842105263158 88 35 99.2 0 3 266 15 102 XP_022591918.1 60S ribosomal protein L36-A [Cyclospora cayetanensis] diamond 1827 106 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
7098259 7098259 PRJNA738523_P_NODE_5746_length_302_cov_2.353712_g5675_i0 PRJNA738523 5746 302 2.353712 7.10821024 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 71.2 6.43e-12   NR CDJ50122.1 51314 g5675 i0 67.3 2.67218543046358 49 16 48.7 0 3 149 46 94 CDJ50122.1 ribosomal RNA large subunit methyltransferase J, putative [Eimeria brunetti] diamond 807 71.6 0.994413407821229 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria brunetti
9647998 9647998 PRJNA738523_P_NODE_6768_length_286_cov_1.446009_g6697_i0 PRJNA738523 6768 286 1.446009 4.13558574 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 122 7.1e-30   NR XP_013249857.1 5801 g6697 i0 64.9 9.74475524475525 94 33 98.6 0 284 3 523 616 XP_013249857.1 Heat shock protein, related [Eimeria acervulina] diamond 2787 123 0.991869918699187 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
26609073 26609073 PRJNA738523_P_NODE_12361_length_248_cov_0.880000_g12290_i0 PRJNA738523 12361 248 0.88 2.1824 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 65.5 3.92e-10   NR XP_067926870.1 483139 g12290 i0 43 1.125 93 41 98 1 3 245 540 632 XP_067926870.1 ribophorin i protein [Cystoisospora suis] diamond 279 65.5 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
26745744 26745744 PRJNA738523_P_NODE_7101_length_283_cov_1.242857_g7030_i0 PRJNA738523 7101 283 1.242857 3.51728531 Haemosporida 5819 SAR_Eukaryotes SAR_Eukaryotes 164 1.54e-49   NR SBS87197.1 864141 g7030 i0 76.6 2.98939929328622 94 22 99.6 0 1 282 34 127 SBS87197.1 mitochondrial import inner membrane translocase subunit TIM17, putative [Plasmodium ovale curtisi] diamond 846 164 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium ovale
27652874 27652874 PRJNA738523_P_NODE_11924_length_249_cov_0.875000_g11853_i0 PRJNA738523 11924 249 0.875 2.17875 Plasmodium relictum 85471 SAR_Eukaryotes SAR_Eukaryotes 52.4 7.74e-6   NR XP_028532681.1 85471 g11853 i0 36 0.903614457831325 75 44 90.4 2 226 2 1 71 XP_028532681.1 ubiquinol-cytochrome c reductase complex subunit, putative [Plasmodium relictum] diamond 225 52.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium relictum
28726276 28726276 PRJNA738523_P_NODE_9807_length_257_cov_1.489130_g9736_i0 PRJNA738523 9807 257 1.48913 3.8270641 Cardiosporidium cionae 476202 SAR_Eukaryotes SAR_Eukaryotes 67.4 9.13e-11   NR KAF8818008.1 476202 g9736 i0 44.4 0.840466926070039 72 38 82.9 2 1 213 276 346 KAF8818008.1 calcium binding egf domain-containing protein [Cardiosporidium cionae] diamond 216 67.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Cardiosporidium Cardiosporidium cionae
29999620 29999620 PRJNA738523_P_NODE_14311_length_244_cov_0.900585_g14240_i0 PRJNA738523 14311 244 0.900585 2.1974274 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 129 4.64e-37   NR XP_003881578.1 572307 g14240 i0 74.7 2.80327868852459 79 20 97.1 0 1 237 7 85 XP_003881578.1 hypothetical protein NCLIV_013380 [Neospora caninum Liverpool] diamond 684 130 0.992307692307692 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
30662939 30662939 PRJNA738523_P_NODE_14393_length_244_cov_0.900585_g14322_i0 PRJNA738523 14393 244 0.900585 2.1974274 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 47.4 9.14e-4   NR XP_067927716.1 483139 g14322 i0 44.9 3.01229508196721 49 27 60.2 0 98 244 1149 1197 XP_067927716.1 zinc finger (ccch type) motif-containing protein [Cystoisospora suis] diamond 735 47.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
30884113 30884113 PRJNA738523_P_NODE_14014_length_245_cov_0.895349_g13943_i0 PRJNA738523 14014 245 0.895349 2.19360505 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 140 1.14e-36   NR XP_029216211.1 94643 g13943 i0 79 4.95918367346939 81 17 99.2 0 2 244 216 296 XP_029216211.1 aldehyde dehydrogenase (NAD) family protein [Besnoitia besnoiti] diamond 1215 140 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
31579768 31579768 PRJNA738523_P_NODE_14576_length_244_cov_0.900585_g14505_i0 PRJNA738523 14576 244 0.900585 2.1974274 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 78.2 1.25e-14   NR XP_067196878.1 515981 g14505 i0 50.6 3.92213114754098 79 37 97.1 1 240 4 334 410 XP_067196878.1 UIM domain and EF hand containing protein that also has a conserved domain between [Cryptosporidium ryanae] diamond 957 78.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium ryanae
32717890 32717890 PRJNA738523_P_NODE_9180_length_263_cov_1.215789_g9109_i0 PRJNA738523 9180 263 1.215789 3.19752507 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 96.7 4.790000000000001e-21   NR XP_067926913.1 483139 g9109 i0 57.3 6.07984790874525 75 31 85.6 1 1 225 149 222 XP_067926913.1 3-oxoacyl-acyl-carrier protein synthase i ii [Cystoisospora suis] diamond 1599 96.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;