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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA738523" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 6 ✖

bioproject 1

  • PRJNA738523 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27030974 27030974 PRJNA738523_P_NODE_13342_length_246_cov_0.890173_g13271_i0 PRJNA738523 13342 246 0.890173 2.18982558 root 1 Root_unresolved Root_unresolved 52.8 1.21e-5   NR PIZ15340.1 1974542 g13271 i0 47.1 3.74390243902439 51 27 62.2 0 243 91 3564 3614 PIZ15340.1 MAG: hypothetical protein COY51_05545 [Candidatus Desantisbacteria bacterium CG_4_10_14_0_8_um_filter_39_17] diamond 921 53.1 0.994350282485876 Bacteria Bacteria candidate phyla   Candidatus Desantisiibacteriota         Candidatus Desantisbacteria bacterium CG_4_10_14_0_8_um_filter_39_17
27526420 27526420 PRJNA738523_P_NODE_11763_length_249_cov_0.875000_g11692_i0 PRJNA738523 11763 249 0.875 2.17875 Candidatus Dependentiae bacterium ADurb.Bin331 1852840 Bacteria Bacteria 60.8 1.71e-8   NR OQA34421.1 1852840 g11692 i0 44.3 0.843373493975904 70 34 84.3 1 234 25 557 621 OQA34421.1 MAG: Polyribonucleotide nucleotidyltransferase [Candidatus Dependentiae bacterium ADurb.Bin331] diamond 210 60.8 1 Bacteria Bacteria candidate phyla             Candidatus Dependentiae bacterium ADurb.Bin331
31548209 31548209 PRJNA738523_P_NODE_15136_length_243_cov_0.905882_g15065_i0 PRJNA738523 15136 243 0.905882 2.20129326 Bacteria 2 Bacteria Bacteria 115 1.8499999999999999e-28   NR OGJ05453.1 1801800 g15065 i0 69.2 11.5555555555556 78 22 96.3 1 3 236 104 179 OGJ05453.1 MAG: glutamate dehydrogenase [Candidatus Nomurabacteria bacterium RIFOXYA2_FULL_35_9] diamond 2808 115 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium RIFOXYA2_FULL_35_9
31854027 31854027 PRJNA738523_P_NODE_2037_length_453_cov_1.826316_g1966_i0 PRJNA738523 2037 453 1.826316 8.27321148 Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_1 2099671 Bacteria Bacteria 91.3 3.97e-20   NR OGG43978.1 1817868 g1966 i0 59.3 1.15894039735099 81 33 53.6 0 210 452 44 124 OGG43978.1 MAG: hypothetical protein A3F84_13085 [Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10] diamond 525 91.3 1 Bacteria Bacteria candidate phyla   Candidatus Handelsmaniibacteriota         Candidatus Handelsmanbacteria bacterium RIFCSPLOWO2_12_FULL_64_10
31980580 31980580 PRJNA738523_P_NODE_12138_length_248_cov_0.880000_g12067_i0 PRJNA738523 12138 248 0.88 2.1824 Candidatus Edwardsbacteria bacterium RifOxyC12_full_54_24 1817854 Bacteria Bacteria 44.7 0.00814   NR OGF05907.1 1817854 g12067 i0 39.3 0.67741935483871 56 34 67.7 0 47 214 427 482 OGF05907.1 MAG: hypothetical protein A2502_08990 [Candidatus Edwardsbacteria bacterium RifOxyC12_full_54_24] diamond 168 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Edwardsiibacteriota         Candidatus Edwardsbacteria bacterium RifOxyC12_full_54_24
32770602 32770602 PRJNA738523_P_NODE_15780_length_242_cov_0.881657_g15709_i0 PRJNA738523 15780 242 0.881657 2.13360994 Candidatus Rokuibacteriota bacterium 2053607 Bacteria Bacteria 42.7 0.0363   NR PYN36993.1 2053607 g15709 i0 46.6 0.71900826446281 58 19 64.5 3 156 1 177 228 PYN36993.1 MAG: apolipoprotein N-acyltransferase [Candidatus Rokuibacteriota bacterium] diamond 174 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Rokuibacteriota         Candidatus Rokuibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;