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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Tubulinea"

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tax_superkingdom 1

tax_phylum 1

  • Tubulinea · 15 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25717476 25717476 PRJNA737474f_S_NODE_7786_length_739_cov_5.429429_g7195_i0 PRJNA737474 7786 739 5.429429 40.12348031 Amoeba proteus 5775 Tubulinea other_Eukaryota 349 8.73e-117   NR AAP88974.1 5775 g7195 i0 85.8 0.799729364005413 197 28 80 0 3 593 194 390 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 591 349 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
26131546 26131546 PRJNA737474g_S_NODE_368821_length_246_cov_1.971098_g367527_i0 PRJNA737474 368821 246 1.971098 4.84890108 Amoeba proteus 5775 Tubulinea other_Eukaryota 131 1.08e-36   NR AAW58116.1 5775 g367527 i0 78.7 0.914634146341463 75 16 91.5 0 246 22 99 173 AAW58116.1 peroxiredoxin, partial [Amoeba proteus] diamond 225 131 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
26260882 26260882 PRJNA737474f_S_NODE_44942_length_350_cov_5.292419_g44264_i0 PRJNA737474 44942 350 5.292419 18.5234665 Amoeba proteus 5775 Tubulinea other_Eukaryota 182 3.7699999999999995e-56   NR AAW58116.1 5775 g44264 i0 78.5 0.917142857142857 107 23 91.7 0 2 322 67 173 AAW58116.1 peroxiredoxin, partial [Amoeba proteus] diamond 321 182 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
26541662 26541662 PRJNA737474g_S_NODE_60384_length_383_cov_2.287097_g59091_i0 PRJNA737474 60384 383 2.287097 8.75958151 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 152 3.65e-43   NR AAY21191.1 5778 g59091 i0 56.8 1.95822454308094 125 54 97.9 0 383 9 118 242 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 750 152 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
26541705 26541705 PRJNA737474g_S_NODE_61256_length_381_cov_3.928571_g59963_i0 PRJNA737474 61256 381 3.928571 14.96785551 Amoeba proteus 5775 Tubulinea other_Eukaryota 140 2.03e-37   NR AAP88974.1 5775 g59963 i0 80.2 0.637795275590551 81 16 63.8 0 377 135 310 390 AAP88974.1 S-adenosylmethionine synthetase 2 [Amoeba proteus] diamond 243 140 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32919906 32919906 PRJNA737474f_S_NODE_64545_length_320_cov_1.975709_g63867_i0 PRJNA737474 64545 320 1.975709 6.3222688 Amoeba proteus 5775 Tubulinea other_Eukaryota 185 1.0499999999999999e-54   NR AAD37351.1 5775 g63867 i0 80.8 0.975 104 20 97.5 0 320 9 90 193 AAD37351.1 pepstatin-insensitive carboxyl proteinase 1, partial [Amoeba proteus] diamond 312 185 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32938188 32938188 PRJNA737474g_S_NODE_84793_length_343_cov_1.737037_g83499_i0 PRJNA737474 84793 343 1.737037 5.95803691 Amoeba proteus 5775 Tubulinea other_Eukaryota 105 5.72e-25   NR BAF75060.1 5775 g83499 i0 73 0.551020408163265 63 17 55.1 0 4 192 225 287 BAF75060.1 aquaporin [Amoeba proteus] diamond 189 105 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
32976100 32976100 PRJNA737474g_S_NODE_119394_length_313_cov_1.225000_g118100_i0 PRJNA737474 119394 313 1.225 3.83425 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 53.9 3.8e-6   NR ABD72526.1 5778 g118100 i0 35.5 3.64217252396166 107 60 95.8 4 311 12 25 129 ABD72526.1 cudA-like protein D, partial [Vermamoeba vermiformis] diamond 1140 53.9 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
32988342 32988342 PRJNA737474f_S_NODE_55267_length_332_cov_2.007722_g54589_i0 PRJNA737474 55267 332 2.007722 6.66563704 Copromyxa protea 931554 Tubulinea other_Eukaryota 65.5 1.02e-9   NR AOW71834.1 931554 g54589 i0 56.3 0.641566265060241 71 30 63.3 1 332 123 340 410 AOW71834.1 bacterial recombinase A, partial [Copromyxa protea] diamond 213 65.5 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea
33005575 33005575 PRJNA737474g_S_NODE_143803_length_299_cov_2.504425_g142509_i0 PRJNA737474 143803 299 2.504425 7.48823075 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 45.4 0.00669   NR AAY21191.1 5778 g142509 i0 38.9 1.63545150501672 54 33 54.2 0 4 165 189 242 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 489 45.4 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
33022092 33022092 PRJNA737474f_S_NODE_17140_length_489_cov_2.995192_g16467_i0 PRJNA737474 17140 489 2.995192 14.64648888 Amoeba proteus 5775 Tubulinea other_Eukaryota 101 1.84e-22   NR BAF75060.1 5775 g16467 i0 73.3 0.368098159509202 60 16 36.8 0 480 301 228 287 BAF75060.1 aquaporin [Amoeba proteus] diamond 180 101 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
33022417 33022417 PRJNA737474f_S_NODE_43612_length_353_cov_2.775000_g42934_i0 PRJNA737474 43612 353 2.775 9.79575 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 77 2.86e-14   NR AAY21191.1 5778 g42934 i0 48.7 1.2917847025495801 76 39 64.6 0 3 230 167 242 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 456 77 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
33022473 33022473 PRJNA737474f_S_NODE_56036_length_331_cov_1.612403_g55358_i0 PRJNA737474 56036 331 1.612403 5.33705393 Amoeba proteus 5775 Tubulinea other_Eukaryota 163 1.93e-47   NR AKN09689.1 5775 g55358 i0 70.6 0.987915407854985 109 32 98.8 0 327 1 113 221 AKN09689.1 Tom20 [Amoeba proteus] diamond 327 163 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Amoebidae Amoeba Amoeba proteus
33124446 33124446 PRJNA737474f_S_NODE_20983_length_448_cov_5.576000_g20306_i0 PRJNA737474 20983 448 5.576 24.98048 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 123 1.5e-31   NR AAY21191.1 5778 g20306 i0 55.9 1.36607142857143 102 45 68.3 0 446 141 141 242 AAY21191.1 Rpl7A, partial [Vermamoeba vermiformis] diamond 612 123 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
33176621 33176621 PRJNA737474g_S_NODE_233784_length_268_cov_1.041026_g232490_i0 PRJNA737474 233784 268 1.041026 2.78994968 Copromyxa protea 931554 Tubulinea other_Eukaryota 57.8 2.5e-7   NR AOW71834.1 931554 g232490 i0 56.1 0.738805970149254 66 28 72.8 1 219 25 345 410 AOW71834.1 bacterial recombinase A, partial [Copromyxa protea] diamond 198 57.8 1 Eukaryota Amoebozoa   Tubulinea Elardia Euamoebida Hartmannellidae Copromyxa Copromyxa protea

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;