RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26400497 26400497 PRJNA737474g_S_NODE_192863_length_280_cov_1.164251_g191569_i0 PRJNA737474 192863 280 1.164251 3.2599028 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 71.2 5.08e-12   NR HEX7786022.1 2072417 g191569 i0 50.7 2.95714285714286 69 33 73.9 1 40 246 353 420 HEX7786022.1 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase [Candidatus Methylomirabilota bacterium] diamond 828 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
33023168 33023168 PRJNA737474g_S_NODE_270588_length_259_cov_1.354839_g269294_i0 PRJNA737474 270588 259 1.354839 3.50903301 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 67 1.22e-10   NR HVG82197.1 2072417 g269294 i0 49.4 1.83011583011583 83 39 96.1 1 254 6 310 389 HVG82197.1 3-hydroxyacyl-CoA dehydrogenase [Candidatus Methylomirabilota bacterium] diamond 474 67 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
33073236 33073236 PRJNA737474f_S_NODE_221005_length_248_cov_1.320000_g220327_i0 PRJNA737474 221005 248 1.32 3.2736 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 43.1 0.0289   NR HEV8642874.1 2072417 g220327 i0 43.2 0.532258064516129 44 25 53.2 0 236 105 37 80 HEV8642874.1 TRAP transporter fused permease subunit [Candidatus Methylomirabilota bacterium] diamond 132 43.1 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;