RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Candidatus Fermentibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fermentibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
33039166 33039166 PRJNA737474f_S_NODE_20348_length_454_cov_2.561680_g19671_i0 PRJNA737474 20348 454 2.56168 11.6300272 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 98.6 1.29e-23   NR PIE52468.1 2044591 g19671 i0 55.3 3.13215859030837 94 41 61.5 1 432 154 5 98 PIE52468.1 MAG: co-chaperone GroES [Candidatus Fermentibacterota bacterium] diamond 1422 98.6 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium
33107239 33107239 PRJNA737474f_S_NODE_130782_length_275_cov_1.133663_g130104_i0 PRJNA737474 130782 275 1.133663 3.11757325 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 44.3 0.014   NR RKZ06953.1 2044591 g130104 i0 36.8 0.621818181818182 57 36 62.2 0 5 175 13 69 RKZ06953.1 MAG: hypothetical protein DRQ25_12745 [Candidatus Fermentibacterota bacterium] diamond 171 44.3 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;