RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26542017 26542017 PRJNA737474g_S_NODE_69480_length_365_cov_4.215753_g68186_i0 PRJNA737474 69480 365 4.215753 15.38749845 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 252 1.33e-79   NR NCN22348.1 2053554 g68186 i0 100 2.98356164383562 121 0 99.5 0 1 363 58 178 NCN22348.1 cell surface protein SprA [Candidatus Falkowbacteria bacterium] diamond 1089 252 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
33023043 33023043 PRJNA737474g_S_NODE_224692_length_270_cov_1.715736_g223398_i0 PRJNA737474 224692 270 1.715736 4.6324872 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 166 5.349999999999998e-47   NR NCN22348.1 2053554 g223398 i0 96.5 2.83333333333333 85 3 94.4 0 268 14 360 444 NCN22348.1 cell surface protein SprA [Candidatus Falkowbacteria bacterium] diamond 765 166 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
33078134 33078134 PRJNA737474e_S_NODE_27613_length_256_cov_2.967213_g26731_i0 PRJNA737474 27613 256 2.967213 7.59606528 Bacteria 2 Bacteria Bacteria 99 1.04e-22   NR PKM91652.1 2013768 g26731 i0 58.8 3.796875 80 33 93.8 0 250 11 22 101 PKM91652.1 MAG: hypothetical protein CVU82_00365 [Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-1] diamond 972 99 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium HGW-Falkowbacteria-1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;