RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA737474 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32920303 32920303 PRJNA737474g_S_NODE_198057_length_278_cov_1.765854_g196763_i0 PRJNA737474 198057 278 1.765854 4.90907412 Candidatus Acetothermia bacterium 2053493 Bacteria Bacteria 102 4.4599999999999996e-23   NR HDN19803.1 2053493 g196763 i0 57.6 0.992805755395683 92 33 95 2 13 276 393 482 HDN19803.1 hypothetical protein [Candidatus Acetothermia bacterium] diamond 276 102 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Acetothermia bacterium
33055992 33055992 PRJNA737474f_S_NODE_117909_length_281_cov_1.687500_g117231_i0 PRJNA737474 117909 281 1.6875 4.741875 Candidatus Bipolaricaulis anaerobius 2026885 Bacteria Bacteria 72 2.97e-12   NR HNR24831.1 2026885 g117231 i0 44.3 0.843416370106762 79 43 83.3 1 239 6 543 621 HNR24831.1 AAA family ATPase [Candidatus Bipolaricaulis anaerobius] diamond 237 72 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota Candidatus Bipolaricaulia Candidatus Bipolaricaulales Candidatus Bipolaricaulaceae Candidatus Bipolaricaulis Candidatus Bipolaricaulis anaerobius
33091349 33091349 PRJNA737474g_S_NODE_265182_length_260_cov_2.229947_g263888_i0 PRJNA737474 265182 260 2.229947 5.7978622 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 43.5 0.0195   NR MBE0634839.1 2306012 g263888 i0 55.2 1.65 29 13 33.5 0 127 41 1 29 MBE0634839.1 hypothetical protein [Candidatus Bipolaricaulota bacterium] diamond 429 43.5 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;