RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_phylum = "Balneolota"

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tax_superkingdom 1

tax_phylum 1

  • Balneolota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA737474 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32919407 32919407 PRJNA737474f_S_NODE_13465_length_549_cov_3.481092_g12800_i0 PRJNA737474 13465 549 3.481092 19.11119508 Balneolaceae bacterium 2053516 Bacteria Bacteria 46.6 0.0273   NR MBN2731507.1 2053516 g12800 i0 52.8 0.19672131147541 36 17 19.7 0 539 432 138 173 MBN2731507.1 sel1 repeat family protein [Balneolaceae bacterium] diamond 108 46.6 1 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae   Balneolaceae bacterium
33146437 33146437 PRJNA737474f_S_NODE_146471_length_268_cov_1.287179_g145793_i0 PRJNA737474 146471 268 1.287179 3.44963972 Pseudomonadati 3379134 Bacteria Bacteria 91.7 3.1400000000000002e-19   NR WP_018126827.1 287535 g145793 i0 57 14.4402985074627 86 37 96.3 0 262 5 379 464 WP_018126827.1 M3 family oligoendopeptidase [Balneola vulgaris] diamond 3870 92 0.996739130434783 Bacteria FCB group Pseudomonadati Balneolota Balneolia Balneolales Balneolaceae Balneola Balneola vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;