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42,850 rows where analysis = "diamond", bioproject = "PRJNA737474" and tax_kingdom = "Pseudomonadati"

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tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 42,850 ✖

bioproject 1

  • PRJNA737474 · 42,850 ✖

analysis 1

  • diamond · 42,850 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25567455 25567455 PRJNA737474b_S_NODE_10233_length_508_cov_2.673563_g9200_i0 PRJNA737474 10233 508 2.673563 13.58170004 Ancylobacter dichloromethanicus 518825 Bacteria Bacteria 212 8.54e-66   NR WP_378235422.1 518825 g9200 i0 94.7 2.01968503937008 114 6 67.3 0 165 506 1 114 WP_378235422.1 respiratory chain complex I subunit 1 family protein [Ancylobacter dichloromethanicus] diamond 1026 212 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Xanthobacteraceae Ancylobacter Ancylobacter dichloromethanicus
25567492 25567492 PRJNA737474b_S_NODE_10721_length_494_cov_2.864608_g9687_i0 PRJNA737474 10721 494 2.864608 14.15116352 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 269 5.58e-85   NR WP_311235388.1 2962592 g9687 i0 91.4 0.983805668016194 162 14 98.4 0 5 490 1 162 WP_311235388.1 methyl-accepting chemotaxis protein, partial [Acidovorax sp. PRC11] diamond 486 269 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25567505 25567505 PRJNA737474b_S_NODE_10889_length_489_cov_54490.995192_g9855_i0 PRJNA737474 10889 489 54490.995192 266460.96648888 Afipia sp. 1871052 Bacteria Bacteria 247 1.22e-79   NR HAO43789.1 1871052 g9855 i0 99.2 1.4601226993865 119 1 73 0 483 127 49 167 HAO43789.1 SAM-dependent methyltransferase [Afipia sp.] diamond 714 247 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25567514 25567514 PRJNA737474b_S_NODE_11041_length_485_cov_6.269417_g10006_i0 PRJNA737474 11041 485 6.269417 30.40667245 Afipia sp. 1871052 Bacteria Bacteria 245 9.86e-81   NR MAH69542.1 1871052 g10006 i0 99.2 1.52164948453608 123 1 76.1 0 117 485 1 123 MAH69542.1 DUF4375 domain-containing protein [Afipia sp.] diamond 738 245 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25567515 25567515 PRJNA737474b_S_NODE_1105_length_3771_cov_6512.310708_g9_i7 PRJNA737474 1105 3771 6512.310708 245579.23679868 Cupriavidus sp. 2SB 2502199 Bacteria Bacteria 1875 0   NR WP_137928376.1 2502199 g9 i7 94.1 0.964200477326969 1212 71 96.4 1 3770 135 1216 2426 WP_137928376.1 hemagglutinin repeat-containing protein, partial [Cupriavidus sp. 2SB] diamond 3636 1875 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. 2SB
25567525 25567525 PRJNA737474b_S_NODE_11217_length_480_cov_5.068796_g10182_i0 PRJNA737474 11217 480 5.068796 24.3302208 Pseudomonadota 1224 Bacteria Bacteria 133 1.58e-37   NR WP_163564720.1 573 g10182 i0 98.4 0.8 64 1 40 0 164 355 1 64 WP_163564720.1 hypothetical protein, partial [Klebsiella pneumoniae] diamond 384 133 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
25567533 25567533 PRJNA737474b_S_NODE_11297_length_478_cov_5.622222_g10262_i0 PRJNA737474 11297 478 5.622222 26.87422116 Herbaspirillum sp. CAH-3 2605746 Bacteria Bacteria 257 7.620000000000001e-85   NR WP_154132568.1 2605746 g10262 i0 100 0.822175732217573 131 0 82.2 0 427 35 70 200 WP_154132568.1 tail assembly protein [Herbaspirillum sp. CAH-3] diamond 393 257 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum Herbaspirillum sp. CAH-3
25567549 25567549 PRJNA737474b_S_NODE_11593_length_472_cov_2.007519_g10558_i0 PRJNA737474 11593 472 2.007519 9.47548968 Phyllobacterium calauticae 2817027 Bacteria Bacteria 202 5.05e-62   NR WP_223613933.1 2817027 g10558 i0 94.4 0.686440677966102 108 6 68.6 0 471 148 187 294 WP_223613933.1 HpcH/HpaI aldolase/citrate lyase family protein [Phyllobacterium calauticae] diamond 324 202 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium calauticae
25567566 25567566 PRJNA737474b_S_NODE_11833_length_466_cov_3.933842_g10798_i0 PRJNA737474 11833 466 3.933842 18.33170372 Afipia broomeae 56946 Bacteria Bacteria 241 7.970000000000001e-71   NR WP_006019970.1 56946 g10798 i0 93.5 0.888412017167382 138 9 88.8 0 53 466 822 959 WP_006019970.1 efflux RND transporter permease subunit [Afipia broomeae] diamond 414 241 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25567569 25567569 PRJNA737474b_S_NODE_11857_length_465_cov_60033.872449_g10822_i0 PRJNA737474 11857 465 60033.872449 279157.50688785 Bosea eneae 151454 Bacteria Bacteria 188 4.7199999999999994e-57   NR WP_068175935.1 151454 g10822 i0 85.8 0.683870967741935 106 15 68.4 0 411 94 1 106 WP_068175935.1 VWA domain-containing protein [Bosea eneae] diamond 318 188 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea eneae
25567570 25567570 PRJNA737474b_S_NODE_1185_length_3437_cov_29.325505_g76_i2 PRJNA737474 1185 3437 29.325505 1007.91760685 Cupriavidus sp. DL-D2 3144974 Bacteria Bacteria 718 1.64e-242   NR WP_346813763.1 3144974 g76 i2 69.8 0.447774221704975 513 137 43.3 2 1922 3409 1 512 WP_346813763.1 phospholipase effector Tle1 domain-containing protein [Cupriavidus sp. DL-D2] diamond 1539 718 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. DL-D2
25567601 25567601 PRJNA737474b_S_NODE_12409_length_455_cov_2.515707_g11374_i0 PRJNA737474 12409 455 2.515707 11.44646685 Enterobacter roggenkampii 1812935 Bacteria Bacteria 185 1.4699999999999997e-57   NR MDM9078591.1 1812935 g11374 i0 85.9 0.652747252747253 99 14 65.3 0 3 299 29 127 MDM9078591.1 hypothetical protein [Enterobacter roggenkampii] diamond 297 185 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter roggenkampii
25567635 25567635 PRJNA737474b_S_NODE_12921_length_446_cov_1.254692_g11885_i0 PRJNA737474 12921 446 1.254692 5.59592632 Herbaspirillum sp. WGmk3 2919925 Bacteria Bacteria 239 1.32e-76   NR WP_252696046.1 2919925 g11885 i0 86.1 0.92152466367713 137 19 92.2 0 414 4 26 162 WP_252696046.1 carbon-nitrogen hydrolase family protein [Herbaspirillum sp. WGmk3] diamond 411 239 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum Herbaspirillum sp. WGmk3
25567654 25567654 PRJNA737474b_S_NODE_13233_length_440_cov_2.365123_g12196_i0 PRJNA737474 13233 440 2.365123 10.4065412 Candidatus Afipia apatlaquensis 2712852 Bacteria Bacteria 237 6.03e-77   NR NGX95216.1 2712852 g12196 i0 94.7 0.906818181818182 133 6 90.7 1 405 7 73 204 NGX95216.1 cobalt transporter [Candidatus Afipia apatlaquensis] diamond 399 237 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Candidatus Afipia apatlaquensis
25567663 25567663 PRJNA737474b_S_NODE_13345_length_438_cov_2.742466_g12308_i0 PRJNA737474 13345 438 2.742466 12.01200108 Afipia 1033 Bacteria Bacteria 264 1.39e-85   NR WP_006021983.1 1033 g12308 i0 93.4 1.86301369863014 136 9 93.2 0 434 27 225 360 WP_006021983.1 MULTISPECIES: aromatic ring-hydroxylating oxygenase subunit alpha [Afipia] diamond 816 264 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25567667 25567667 PRJNA737474b_S_NODE_1337_length_2927_cov_14.445340_g335_i4 PRJNA737474 1337 2927 14.44534 422.8151018 Cupriavidus sp. SW-Y-13 2653854 Bacteria Bacteria 1420 0   NR WP_255459583.1 2653854 g335 i4 94.3 2.83293474547318 975 56 99.9 0 2925 1 1281 2255 WP_255459583.1 hemagglutinin repeat-containing protein [Cupriavidus sp. SW-Y-13] diamond 8292 1420 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. SW-Y-13
25567669 25567669 PRJNA737474b_S_NODE_13417_length_437_cov_1.802198_g12380_i0 PRJNA737474 13417 437 1.802198 7.87560526 Burkholderiaceae bacterium 2030806 Bacteria Bacteria 171 1.29e-48   NR MBY0367899.1 2030806 g12380 i0 100 0.562929061784897 82 0 56.3 0 3 248 345 426 MBY0367899.1 hypothetical protein [Burkholderiaceae bacterium] diamond 246 171 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae   Burkholderiaceae bacterium
25567683 25567683 PRJNA737474b_S_NODE_13641_length_433_cov_4.780556_g12604_i0 PRJNA737474 13641 433 4.780556 20.69980748 unclassified Afipia 2642050 Bacteria Bacteria 266 1.36e-87   NR WP_024920440.1 2642050 g12604 i0 99.2 0.8729792147806 126 1 87.3 0 379 2 35 160 WP_024920440.1 MULTISPECIES: outer membrane protein [unclassified Afipia] diamond 378 266 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25567687 25567687 PRJNA737474b_S_NODE_13705_length_432_cov_6.902507_g12668_i0 PRJNA737474 13705 432 6.902507 29.81883024 Candidatus Clavichlamydia salmonicola 469812 Bacteria Bacteria 59.7 3.44e-7   NR MBF5050938.1 469812 g12668 i0 54.8 0.590277777777778 42 19 29.2 0 3 128 775 816 MBF5050938.1 Lon protease [Candidatus Clavichlamydia salmonicola] diamond 255 59.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales Candidatus Clavichlamydiaceae Candidatus Clavichlamydia Candidatus Clavichlamydia salmonicola
25567717 25567717 PRJNA737474b_S_NODE_14057_length_427_cov_1.361582_g13020_i0 PRJNA737474 14057 427 1.361582 5.81395514 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 276 2.03e-89   NR WP_311235300.1 2962592 g13020 i0 98.6 0.990632318501171 141 2 99.1 0 424 2 158 298 WP_311235300.1 sugar transferase [Acidovorax sp. PRC11] diamond 423 276 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25567721 25567721 PRJNA737474b_S_NODE_1409_length_2763_cov_15.369517_g804_i0 PRJNA737474 1409 2763 15.369517 424.65975471 Cupriavidus sp. SW-Y-13 2653854 Bacteria Bacteria 918 9.19000000000008e-293   NR WP_237380067.1 2653854 g804 i0 92.8 0.555917480998914 512 33 55.6 2 1206 2741 1 508 WP_237380067.1 non-ribosomal peptide synthetase [Cupriavidus sp. SW-Y-13] diamond 1536 918 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. SW-Y-13
25567730 25567730 PRJNA737474b_S_NODE_14201_length_425_cov_1.383523_g13164_i0 PRJNA737474 14201 425 1.383523 5.87997275 Hyphomicrobiales 356 Bacteria Bacteria 166 1.58e-48   NR WP_156451634.1 356 g13164 i0 98.9 0.628235294117647 89 1 62.8 0 159 425 112 200 WP_156451634.1 MULTISPECIES: hypothetical protein [Hyphomicrobiales] diamond 267 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales      
25567750 25567750 PRJNA737474b_S_NODE_14529_length_420_cov_2.968300_g13491_i0 PRJNA737474 14529 420 2.9683 12.46686 Afipia broomeae ATCC 49717 883078 Bacteria Bacteria 164 7.69e-50   NR EKS34652.1 883078 g13491 i0 96.3 0.585714285714286 82 3 58.6 0 11 256 1 82 EKS34652.1 hypothetical protein HMPREF9695_04562 [Afipia broomeae ATCC 49717] diamond 246 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25567769 25567769 PRJNA737474b_S_NODE_14801_length_416_cov_2.991254_g13762_i0 PRJNA737474 14801 416 2.991254 12.44361664 Bacteriovoracia bacterium 3058048 Bacteria Bacteria 101 2.52e-22   NR MFP5492537.1 3058048 g13762 i0 64.3 1.00961538461538 70 25 50.5 0 2 211 337 406 MFP5492537.1 isocitrate dehydrogenase (NADP(+)) [Bacteriovoracia bacterium] diamond 420 101 1 Bacteria   Pseudomonadati Bdellovibrionota Bacteriovoracia       Bacteriovoracia bacterium
25567805 25567805 PRJNA737474b_S_NODE_15353_length_409_cov_2.616071_g14314_i0 PRJNA737474 15353 409 2.616071 10.69973039 Afipia 1033 Bacteria Bacteria 215 4.55e-65   NR HAP46055.1 1871052 g14314 i0 100 1.55501222493888 106 0 77.8 0 90 407 324 429 HAP46055.1 glucose-methanol-choline oxidoreductase [Afipia sp.] diamond 636 215 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25567809 25567809 PRJNA737474b_S_NODE_15385_length_408_cov_72706.588060_g14346_i0 PRJNA737474 15385 408 72706.58806 296642.8792848 Desulfurellales bacterium 2482794 Bacteria Bacteria 139 1.99e-39   NR TXH58056.1 2482794 g14346 i0 89.3 0.551470588235294 75 8 55.1 0 297 73 38 112 TXH58056.1 MAG: hypothetical protein E6Q97_03180 [Desulfurellales bacterium] diamond 225 139 1 Bacteria   Pseudomonadati Campylobacterota Desulfurellia Desulfurellales     Desulfurellales bacterium
25567821 25567821 PRJNA737474b_S_NODE_15529_length_407_cov_1.278443_g14490_i0 PRJNA737474 15529 407 1.278443 5.20326301 Ottowia sp. 1898956 Bacteria Bacteria 120 2.76e-29   NR WP_293195579.1 1898956 g14490 i0 52.2 0.832923832923833 113 54 83.3 0 349 11 253 365 WP_293195579.1 type IV CRISPR-associated protein Csf2 [Ottowia sp.] diamond 339 120 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Ottowia Ottowia sp.
25567822 25567822 PRJNA737474b_S_NODE_1553_length_2471_cov_30.682652_g6_i122 PRJNA737474 1553 2471 30.682652 758.16833092 unclassified Cupriavidus 2640874 Bacteria Bacteria 332 1.16e-105   NR WP_137928616.1 2640874 g6 i122 95.2 0.203966005665722 168 8 20.4 0 1624 1121 1 168 WP_137928616.1 MULTISPECIES: hypothetical protein [unclassified Cupriavidus] diamond 504 332 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus  
25567838 25567838 PRJNA737474b_S_NODE_15753_length_404_cov_1.413897_g14714_i0 PRJNA737474 15753 404 1.413897 5.71214388 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 135 1.06e-33   NR WP_311232796.1 2962592 g14714 i0 100 0.482673267326733 65 0 48.3 0 4 198 823 887 WP_311232796.1 ATP-binding protein [Acidovorax sp. PRC11] diamond 195 135 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25567853 25567853 PRJNA737474b_S_NODE_15993_length_400_cov_7.691131_g14954_i0 PRJNA737474 15993 400 7.691131 30.764524 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 90.5 3.3e-20   NR WP_311232156.1 2962592 g14954 i0 69.1 0.4125 55 17 41.3 0 261 97 1 55 WP_311232156.1 hypothetical protein [Acidovorax sp. PRC11] diamond 165 90.5 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25567855 25567855 PRJNA737474b_S_NODE_1601_length_2387_cov_35.528522_g44_i7 PRJNA737474 1601 2387 35.528522 848.06582014 Cupriavidus sp. D384 1538095 Bacteria Bacteria 841 1.05e-296   NR WP_066735434.1 1538095 g44 i7 64.9 0.809384164222874 644 213 80.8 4 384 2312 1 632 WP_066735434.1 T6SS phospholipase effector Tle1-like catalytic domain-containing protein [Cupriavidus sp. D384] diamond 1932 841 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. D384
25567880 25567880 PRJNA737474b_S_NODE_16305_length_397_cov_1.348765_g15266_i0 PRJNA737474 16305 397 1.348765 5.35459705 Afipia 1033 Bacteria Bacteria 230 2.22e-69   NR WP_157223969.1 56946 g15266 i0 96.1 4.79848866498741 127 5 96 0 395 15 237 363 WP_157223969.1 AI-2E family transporter [Afipia broomeae] diamond 1905 230 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25567886 25567886 PRJNA737474b_S_NODE_16465_length_395_cov_2.878882_g15426_i0 PRJNA737474 16465 395 2.878882 11.3715839 Roseateles sp. 1971397 Bacteria Bacteria 229 1.24e-74   NR MEE9477815.1 1971397 g15426 i0 97.4 1.73164556962025 114 3 86.6 0 39 380 6 119 MEE9477815.1 cupin domain-containing protein [Roseateles sp.] diamond 684 229 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25567889 25567889 PRJNA737474b_S_NODE_16505_length_395_cov_0.993789_g15466_i0 PRJNA737474 16505 395 0.993789 3.92546655 unclassified Bosea (in: a-proteobacteria) 2653178 Bacteria Bacteria 138 1.62e-37   NR WP_152014172.1 2653178 g15466 i0 85.4 0.622784810126582 82 12 62.3 0 362 117 143 224 WP_152014172.1 MULTISPECIES: class I SAM-dependent methyltransferase [unclassified Bosea (in: a-proteobacteria)] diamond 246 138 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea  
25567909 25567909 PRJNA737474b_S_NODE_16801_length_391_cov_2.047170_g15762_i0 PRJNA737474 16801 391 2.04717 8.0044347 Afipia 1033 Bacteria Bacteria 233 1.73e-75   NR HAP46479.1 1871052 g15762 i0 96.1 1.9795396419437301 129 5 99 0 388 2 64 192 HAP46479.1 hypothetical protein [Afipia sp.] diamond 774 233 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25567957 25567957 PRJNA737474b_S_NODE_17569_length_382_cov_13120.339806_g16530_i0 PRJNA737474 17569 382 13120.339806 50119.69805892 Bosea sp. TND4EK4 1907408 Bacteria Bacteria 165 1.12e-44   NR WP_076437287.1 1907408 g16530 i0 83.8 0.777486910994764 99 16 77.7 0 302 6 584 682 WP_076437287.1 glycoside hydrolase family 3 N-terminal domain-containing protein [Bosea sp. TND4EK4] diamond 297 165 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. TND4EK4
25567966 25567966 PRJNA737474b_S_NODE_17737_length_381_cov_0.974026_g16698_i0 PRJNA737474 17737 381 0.974026 3.71103906 Roseateles sp. 1971397 Bacteria Bacteria 238 3.12e-77   NR MEE8614754.1 1971397 g16698 i0 94.4 2.92913385826772 124 7 97.6 0 374 3 13 136 MEE8614754.1 DUF3734 domain-containing protein [Roseateles sp.] diamond 1116 238 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25567967 25567967 PRJNA737474b_S_NODE_17753_length_380_cov_7.798046_g16714_i0 PRJNA737474 17753 380 7.798046 29.6325748 Agrobacterium sp. SUL3 1701910 Bacteria Bacteria 237 1.19e-75   NR WP_237681240.1 1701910 g16714 i0 99.1 0.923684210526316 117 1 92.4 0 370 20 133 249 WP_237681240.1 ABC transporter substrate-binding protein [Agrobacterium sp. SUL3] diamond 351 237 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Agrobacterium Agrobacterium sp. SUL3
25567974 25567974 PRJNA737474b_S_NODE_17817_length_380_cov_1.250814_g16778_i0 PRJNA737474 17817 380 1.250814 4.7530932 Bosea sp. TND4EK4 1907408 Bacteria Bacteria 159 1.09e-44   NR SIQ36792.1 1907408 g16778 i0 96.5 1.35789473684211 86 3 67.9 0 5 262 303 388 SIQ36792.1 Transposase [Bosea sp. TND4EK4] diamond 516 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. TND4EK4
25567987 25567987 PRJNA737474b_S_NODE_17993_length_378_cov_1.209836_g16954_i0 PRJNA737474 17993 378 1.209836 4.57318008 Piscinibacter sp. 1903157 Bacteria Bacteria 58.9 3.48e-7   NR WP_293433420.1 1903157 g16954 i0 82.1 0.30952380952381 39 7 31 0 157 41 14 52 WP_293433420.1 methyl-accepting chemotaxis protein [Piscinibacter sp.] diamond 117 58.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Piscinibacter Piscinibacter sp.
25567992 25567992 PRJNA737474b_S_NODE_18065_length_377_cov_1.894737_g17026_i0 PRJNA737474 18065 377 1.894737 7.14315849 Afipia 1033 Bacteria Bacteria 204 4.98e-64   NR WP_006019137.1 1033 g17026 i0 99 0.803713527851459 101 1 80.4 0 2 304 104 204 WP_006019137.1 MULTISPECIES: recombinase family protein [Afipia] diamond 303 204 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568013 25568013 PRJNA737474b_S_NODE_18457_length_373_cov_2.520000_g17418_i0 PRJNA737474 18457 373 2.52 9.3996 Paracidovorax oryzae 862720 Bacteria Bacteria 84 5.63e-17   NR WP_029412451.1 862720 g17418 i0 75.9 0.86058981233244 54 13 43.4 0 361 200 171 224 WP_029412451.1 SOS response-associated peptidase [Paracidovorax oryzae] diamond 321 84 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Paracidovorax Paracidovorax oryzae
25568039 25568039 PRJNA737474b_S_NODE_18769_length_370_cov_1.494949_g17730_i0 PRJNA737474 18769 370 1.494949 5.5313113 Afipia 1033 Bacteria Bacteria 224 3.849999999999999e-68   NR WP_204367761.1 1033 g17730 i0 94 0.948648648648649 117 7 94.9 0 3 353 69 185 WP_204367761.1 MULTISPECIES: B12-binding domain-containing radical SAM protein [Afipia] diamond 351 224 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568041 25568041 PRJNA737474b_S_NODE_18809_length_369_cov_4.858108_g17770_i0 PRJNA737474 18809 369 4.858108 17.92641852 Bosea sp. ASV33 2795106 Bacteria Bacteria 57.4 8.8e-7   NR WP_248311336.1 2795106 g17770 i0 59.5 0.341463414634146 42 17 34.1 0 193 318 1 42 WP_248311336.1 NAD(P)H-dependent oxidoreductase [Bosea sp. ASV33] diamond 126 57.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. ASV33
25568044 25568044 PRJNA737474b_S_NODE_18849_length_369_cov_2.287162_g17810_i0 PRJNA737474 18849 369 2.287162 8.43962778 Escherichia coli 562 Bacteria Bacteria 98.2 9.37e-23   NR WP_106489794.1 562 g17810 i0 98 0.398373983739837 49 1 39.8 0 147 1 1 49 WP_106489794.1 LysE family transporter [Escherichia coli] diamond 147 98.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
25568063 25568063 PRJNA737474b_S_NODE_19193_length_366_cov_1.030717_g18154_i0 PRJNA737474 19193 366 1.030717 3.77242422 Bradyrhizobium viridifuturi 1654716 Bacteria Bacteria 215 1.98e-63   NR MBR1041080.1 1654716 g18154 i0 94.8 0.942622950819672 115 6 94.3 0 2 346 316 430 MBR1041080.1 phosphopyruvate hydratase [Bradyrhizobium viridifuturi] diamond 345 215 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium viridifuturi
25568069 25568069 PRJNA737474b_S_NODE_19289_length_365_cov_1.222603_g18250_i0 PRJNA737474 19289 365 1.222603 4.46250095 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 72.4 3.85e-12   NR WP_105736877.1 28101 g18250 i0 97.1 0.279452054794521 34 1 27.9 0 177 278 1 34 WP_105736877.1 zinc-dependent alcohol dehydrogenase family protein [Phyllobacterium myrsinacearum] diamond 102 72.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
25568073 25568073 PRJNA737474b_S_NODE_19353_length_364_cov_2.487973_g18314_i0 PRJNA737474 19353 364 2.487973 9.05622172 unclassified Afipia 2642050 Bacteria Bacteria 167 6.91e-51   NR WP_024920552.1 2642050 g18314 i0 98.9 0.733516483516483 89 1 73.4 0 363 97 52 140 WP_024920552.1 MULTISPECIES: DUF2177 family protein [unclassified Afipia] diamond 267 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568075 25568075 PRJNA737474b_S_NODE_19369_length_364_cov_1.800687_g18330_i0 PRJNA737474 19369 364 1.800687 6.55450068 Solimonas sp. K1W22B-7 2303331 Bacteria Bacteria 69.7 5.55e-11   NR WP_117293671.1 2303331 g18330 i0 37.6 0.832417582417582 101 63 83.2 0 337 35 566 666 WP_117293671.1 AAA family ATPase [Solimonas sp. K1W22B-7] diamond 303 69.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Nevskiales Nevskiaceae Solimonas Solimonas sp. K1W22B-7
25568137 25568137 PRJNA737474b_S_NODE_201_length_13599_cov_16.502070_g67_i1 PRJNA737474 201 13599 16.50207 2244.1164993 Cupriavidus sp. 2SB 2502199 Bacteria Bacteria 3197 0   NR WP_137927086.1 2502199 g67 i1 99.6 0.365320979483786 1656 7 36.5 0 38 5005 1 1656 WP_137927086.1 trifunctional serine/threonine-protein kinase/ATP-binding protein/sensor histidine kinase [Cupriavidus sp. 2SB] diamond 4968 3197 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. 2SB
25568141 25568141 PRJNA737474b_S_NODE_20241_length_356_cov_4.950530_g19202_i0 PRJNA737474 20241 356 4.95053 17.6238868 Burkholderiales 80840 Bacteria Bacteria 243 3.17e-74   NR WP_373797809.1 1287735 g19202 i0 99.1 1.97191011235955 117 1 98.6 0 352 2 269 385 WP_373797809.1 TonB-dependent receptor, partial [Achromobacter insuavis] diamond 702 243 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter insuavis
25568166 25568166 PRJNA737474b_S_NODE_20537_length_353_cov_14220.721429_g19498_i0 PRJNA737474 20537 353 14220.721429 50199.14664437 Hyphomicrobiales bacterium 1909294 Bacteria Bacteria 166 7.009999999999999e-47   NR MCX7324117.1 1909294 g19498 i0 83.1 0.756373937677054 89 15 75.6 0 350 84 319 407 MCX7324117.1 M23 family metallopeptidase [Hyphomicrobiales bacterium] diamond 267 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales     Hyphomicrobiales bacterium
25568169 25568169 PRJNA737474b_S_NODE_20585_length_353_cov_3.175000_g19546_i0 PRJNA737474 20585 353 3.175 11.20775 Afipia broomeae 56946 Bacteria Bacteria 181 3.23e-54   NR MFT6671465.1 56946 g19546 i0 95.9 0.824362606232295 97 4 82.4 0 61 351 15 111 MFT6671465.1 3-hydroxyisobutyrate dehydrogenase-like beta-hydroxyacid dehydrogenase [Afipia broomeae] diamond 291 181 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25568172 25568172 PRJNA737474b_S_NODE_20633_length_353_cov_1.532143_g19594_i0 PRJNA737474 20633 353 1.532143 5.40846479 Bosea 85413 Bacteria Bacteria 150 4.68e-41   NR WP_293801196.1 211457 g19594 i0 68.6 1.70821529745042 102 24 79.9 2 322 41 152 253 WP_293801196.1 pilus assembly protein TadG-related protein [uncultured Bosea sp.] diamond 603 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea uncultured Bosea sp.
25568227 25568227 PRJNA737474b_S_NODE_21393_length_346_cov_7473.534799_g20354_i0 PRJNA737474 21393 346 7473.534799 25858.43040454 Sphaerotilaceae 2975441 Bacteria Bacteria 170 1.54e-51   NR MEE8616858.1 1971397 g20354 i0 100 1.52601156069364 88 0 76.3 0 264 1 22 109 MEE8616858.1 hypothetical protein [Roseateles sp.] diamond 528 170 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25568261 25568261 PRJNA737474b_S_NODE_21825_length_343_cov_2.418519_g20786_i0 PRJNA737474 21825 343 2.418519 8.29552017 Alphaproteobacteria 28211 Bacteria Bacteria 214 2.78e-65   NR WP_037470095.1 28211 g20786 i0 94.7 0.988338192419825 113 6 98.8 0 2 340 254 366 WP_037470095.1 MULTISPECIES: hypothetical protein [Alphaproteobacteria] diamond 339 214 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria        
25568276 25568276 PRJNA737474b_S_NODE_22025_length_342_cov_1.074349_g20986_i0 PRJNA737474 22025 342 1.074349 3.67427358 Bosea sp. (in: a-proteobacteria) 1871050 Bacteria Bacteria 183 6.59e-53   NR WP_291671843.1 1871050 g20986 i0 88.2 0.964912280701754 110 13 96.5 0 342 13 395 504 WP_291671843.1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [Bosea sp. (in: a-proteobacteria)] diamond 330 183 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. (in: a-proteobacteria)
25568278 25568278 PRJNA737474b_S_NODE_22089_length_341_cov_2.563433_g21050_i0 PRJNA737474 22089 341 2.563433 8.74130653 Afipia 1033 Bacteria Bacteria 213 3.46e-64   NR HAP48526.1 1871052 g21050 i0 96.5 1.98826979472141 113 4 99.4 0 340 2 187 299 HAP48526.1 ATP-dependent DNA ligase [Afipia sp.] diamond 678 213 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25568298 25568298 PRJNA737474b_S_NODE_22377_length_339_cov_2.026316_g21338_i0 PRJNA737474 22377 339 2.026316 6.86921124 Chromatiaceae bacterium 2049432 Bacteria Bacteria 56.2 2.09e-6   NR MCF8002747.1 2049432 g21338 i0 43.5 1.08849557522124 62 34 54.9 1 277 92 143 203 MCF8002747.1 hypothetical protein [Chromatiaceae bacterium] diamond 369 56.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Chromatiaceae   Chromatiaceae bacterium
25568322 25568322 PRJNA737474b_S_NODE_22657_length_337_cov_2.193182_g21618_i0 PRJNA737474 22657 337 2.193182 7.39102334 Afipia 1033 Bacteria Bacteria 200 1.61e-63   NR WP_024918980.1 1033 g21618 i0 96.1 1.8160237388724 102 4 90.8 0 329 24 63 164 WP_024918980.1 MULTISPECIES: DUF3455 domain-containing protein [Afipia] diamond 612 200 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568333 25568333 PRJNA737474b_S_NODE_22793_length_336_cov_2.266160_g21754_i0 PRJNA737474 22793 336 2.26616 7.6142976000000004 Sphaerotilaceae 2975441 Bacteria Bacteria 88.2 2.42e-20   NR MEE8616519.1 1971397 g21754 i0 84.6 0.928571428571429 52 8 46.4 0 161 6 1 52 MEE8616519.1 helix-turn-helix domain-containing protein [Roseateles sp.] diamond 312 88.2 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25568389 25568389 PRJNA737474b_S_NODE_23609_length_330_cov_2.937743_g22570_i0 PRJNA737474 23609 330 2.937743 9.6945519 Hyphomicrobiales 356 Bacteria Bacteria 160 6.51e-46   NR WP_156451702.1 1768789 g22570 i0 97.5 1.45454545454545 80 2 72.7 0 242 3 1 80 WP_156451702.1 ISL3 family transposase, partial [Methylobacterium sp. CCH7-A2] diamond 480 161 0.993788819875776 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. CCH7-A2
25568401 25568401 PRJNA737474b_S_NODE_2377_length_1597_cov_7.709974_g1599_i0 PRJNA737474 2377 1597 7.709974 123.12828478 Cupriavidus sp. SW-Y-13 2653854 Bacteria Bacteria 821 4.1999999999999996e-271   NR WP_160471687.1 2653854 g1599 i0 94.6 0.937382592360676 499 27 93.7 0 101 1597 676 1174 WP_160471687.1 Ig-like domain-containing protein [Cupriavidus sp. SW-Y-13] diamond 1497 821 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Burkholderiaceae Cupriavidus Cupriavidus sp. SW-Y-13
25568403 25568403 PRJNA737474b_S_NODE_23793_length_329_cov_1.777344_g22754_i0 PRJNA737474 23793 329 1.777344 5.84746176 Afipia 1033 Bacteria Bacteria 168 4.15e-49   NR HAQ95378.1 1871052 g22754 i0 100 1.55015197568389 85 0 77.5 0 256 2 146 230 HAQ95378.1 acyl-CoA dehydrogenase [Afipia sp.] diamond 510 168 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25568404 25568404 PRJNA737474b_S_NODE_23809_length_329_cov_1.390625_g22770_i0 PRJNA737474 23809 329 1.390625 4.57515625 Candidatus Afipia apatlaquensis 2712852 Bacteria Bacteria 210 9.280000000000001e-66   NR NGX99071.1 2712852 g22770 i0 93.6 0.993920972644377 109 7 99.4 0 327 1 120 228 NGX99071.1 cytochrome ubiquinol oxidase subunit I [Candidatus Afipia apatlaquensis] diamond 327 210 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Candidatus Afipia apatlaquensis
25568423 25568423 PRJNA737474b_S_NODE_2409_length_1587_cov_5.618890_g1626_i0 PRJNA737474 2409 1587 5.61889 89.1717843 Afipia massiliensis 211460 Bacteria Bacteria 608 2.0199999999999994e-213   NR WP_046828531.1 211460 g1626 i0 99.4 0.586011342155009 310 2 58.6 0 588 1517 1 310 WP_046828531.1 CmpA/NrtA family ABC transporter substrate-binding protein [Afipia massiliensis] diamond 930 608 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia massiliensis
25568438 25568438 PRJNA737474b_S_NODE_24353_length_325_cov_1.591270_g23314_i0 PRJNA737474 24353 325 1.59127 5.1716275 Afipia clevelandensis 1034 Bacteria Bacteria 179 2.1e-53   NR WP_002713204.1 1034 g23314 i0 98.9 0.84 91 1 84 0 51 323 152 242 WP_002713204.1 Bug family tripartite tricarboxylate transporter substrate binding protein [Afipia clevelandensis] diamond 273 179 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia clevelandensis
25568456 25568456 PRJNA737474b_S_NODE_24697_length_323_cov_1.680000_g23658_i0 PRJNA737474 24697 323 1.68 5.4264 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 194 5.47e-59   NR WP_311232647.1 2962592 g23658 i0 95.8 1.79256965944272 95 4 88.2 0 35 319 138 232 WP_311232647.1 GDP-L-fucose synthase [Acidovorax sp. PRC11] diamond 579 194 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25568515 25568515 PRJNA737474b_S_NODE_25761_length_316_cov_1.452675_g24722_i0 PRJNA737474 25761 316 1.452675 4.590453 Bradyrhizobium sp. OHSU_III 1297865 Bacteria Bacteria 203 9.07e-64   NR WP_024582888.1 1297865 g24722 i0 95.2 0.987341772151899 104 5 98.7 0 3 314 122 225 WP_024582888.1 L,D-transpeptidase [Bradyrhizobium sp. OHSU_III] diamond 312 203 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. OHSU_III
25568536 25568536 PRJNA737474b_S_NODE_26009_length_314_cov_4.925311_g24970_i0 PRJNA737474 26009 314 4.925311 15.46547654 Sphingomonas sp. TF3 2495580 Bacteria Bacteria 99.4 5.869999999999999e-23   NR WP_126847420.1 2495580 g24970 i0 88.2 0.487261146496815 51 6 48.7 0 2 154 204 254 WP_126847420.1 MBL fold metallo-hydrolase [Sphingomonas sp. TF3] diamond 153 99.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. TF3
25568537 25568537 PRJNA737474b_S_NODE_26017_length_314_cov_4.033195_g24978_i0 PRJNA737474 26017 314 4.033195 12.6642323 Kaistia sp. SCN 65-12 1660103 Bacteria Bacteria 131 8.6e-34   NR ODT15295.1 1660103 g24978 i0 77.3 0.840764331210191 88 17 84.1 1 2 265 354 438 ODT15295.1 MAG: hypothetical protein ABS35_31890 [Kaistia sp. SCN 65-12] diamond 264 131 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Kaistiaceae Kaistia Kaistia sp. SCN 65-12
25568543 25568543 PRJNA737474b_S_NODE_26129_length_314_cov_1.058091_g25090_i0 PRJNA737474 26129 314 1.058091 3.32240574 Burkholderiales 80840 Bacteria Bacteria 179 5.45e-50   NR WP_373716081.1 1971397 g25090 i0 94.2 2.95222929936306 103 6 98.4 0 309 1 3 105 WP_373716081.1 DUF1631 family protein [Roseateles sp.] diamond 927 179 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25568552 25568552 PRJNA737474b_S_NODE_26217_length_313_cov_3.012500_g25178_i0 PRJNA737474 26217 313 3.0125 9.429125 Afipia sp. 1871052 Bacteria Bacteria 164 2.41e-47   NR HAO40988.1 1871052 g25178 i0 100 0.795527156549521 83 0 79.6 0 22 270 1 83 HAO40988.1 DUF445 domain-containing protein [Afipia sp.] diamond 249 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25568561 25568561 PRJNA737474b_S_NODE_26361_length_312_cov_5.121339_g25322_i0 PRJNA737474 26361 312 5.121339 15.97857768 Afipia broomeae 56946 Bacteria Bacteria 179 3.869999999999999e-52   NR WP_006019394.1 56946 g25322 i0 97.7 0.846153846153846 88 2 84.6 0 301 38 69 156 WP_006019394.1 MFS transporter [Afipia broomeae] diamond 264 179 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25568579 25568579 PRJNA737474b_S_NODE_26625_length_311_cov_1.575630_g25586_i0 PRJNA737474 26625 311 1.57563 4.9002093 Afipia massiliensis 211460 Bacteria Bacteria 166 3.27e-50   NR WP_046828987.1 211460 g25586 i0 90.4 0.906752411575563 94 9 90.7 0 283 2 1 94 WP_046828987.1 tyrosine phosphatase family protein [Afipia massiliensis] diamond 282 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia massiliensis
25568630 25568630 PRJNA737474b_S_NODE_27385_length_307_cov_1.508547_g26346_i0 PRJNA737474 27385 307 1.508547 4.63123929 unclassified Afipia 2642050 Bacteria Bacteria 104 7.04e-25   NR WP_024921480.1 2642050 g26346 i0 85.9 0.830618892508143 85 12 83.1 0 52 306 88 172 WP_024921480.1 MULTISPECIES: hypothetical protein [unclassified Afipia] diamond 255 104 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568660 25568660 PRJNA737474b_S_NODE_27897_length_304_cov_2.147186_g26858_i0 PRJNA737474 27897 304 2.147186 6.52744544 Afipia broomeae 56946 Bacteria Bacteria 119 1.7999999999999998e-31   NR WP_006022424.1 56946 g26858 i0 100 0.572368421052632 58 0 57.2 0 180 7 1 58 WP_006022424.1 DUF1801 domain-containing protein [Afipia broomeae] diamond 174 119 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25568687 25568687 PRJNA737474b_S_NODE_28289_length_302_cov_2.497817_g27250_i0 PRJNA737474 28289 302 2.497817 7.54340734 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 180 3.5e-50   NR WP_247390067.1 2631580 g27250 i0 89 1.98675496688742 100 11 99.3 0 2 301 252 351 WP_247390067.1 MULTISPECIES: Eco57I restriction-modification methylase domain-containing protein [unclassified Bradyrhizobium] diamond 600 180 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
25568700 25568700 PRJNA737474b_S_NODE_28441_length_301_cov_5.614035_g27402_i0 PRJNA737474 28441 301 5.614035 16.89824535 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 161 9.1e-45   NR WP_311233534.1 2962592 g27402 i0 96.3 0.807308970099668 81 3 80.7 0 47 289 144 224 WP_311233534.1 B12-binding domain-containing radical SAM protein [Acidovorax sp. PRC11] diamond 243 161 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25568746 25568746 PRJNA737474b_S_NODE_29081_length_298_cov_1.862222_g28042_i0 PRJNA737474 29081 298 1.862222 5.54942156 Phyllobacterium calauticae 2817027 Bacteria Bacteria 199 4.9799999999999995e-62   NR WP_223613773.1 2817027 g28042 i0 94.9 0.986577181208054 98 5 98.7 0 3 296 43 140 WP_223613773.1 transglutaminase-like domain-containing protein [Phyllobacterium calauticae] diamond 294 199 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium calauticae
25568764 25568764 PRJNA737474b_S_NODE_29353_length_297_cov_1.084821_g28314_i0 PRJNA737474 29353 297 1.084821 3.22191837 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 191 1.01e-56   NR WP_311233611.1 2962592 g28314 i0 88.8 0.98989898989899 98 11 99 0 2 295 233 330 WP_311233611.1 hypothetical protein [Acidovorax sp. PRC11] diamond 294 191 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25568824 25568824 PRJNA737474b_S_NODE_30233_length_293_cov_1.090909_g29194_i0 PRJNA737474 30233 293 1.090909 3.19636337 unclassified Afipia 2642050 Bacteria Bacteria 169 5.46e-49   NR WP_024921285.1 2642050 g29194 i0 90.4 0.962457337883959 94 9 96.2 0 284 3 256 349 WP_024921285.1 MULTISPECIES: alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase [unclassified Afipia] diamond 282 169 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25568871 25568871 PRJNA737474b_S_NODE_3081_length_1234_cov_4.180879_g2225_i0 PRJNA737474 3081 1234 4.180879 51.59204686 Afipia broomeae 56946 Bacteria Bacteria 407 1.81e-138   NR WP_041711757.1 56946 g2225 i0 98 0.49837925445705 205 4 49.8 0 622 8 1 205 WP_041711757.1 AraC family transcriptional regulator [Afipia broomeae] diamond 615 407 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25568969 25568969 PRJNA737474b_S_NODE_32033_length_286_cov_1.154930_g30994_i0 PRJNA737474 32033 286 1.15493 3.3030998 Acidovorax sp. PRC11 2962592 Bacteria Bacteria 80.9 2.26e-15   NR WP_311232139.1 2962592 g30994 i0 60.2 0.870629370629371 83 33 87.1 0 259 11 228 310 WP_311232139.1 TolC family protein [Acidovorax sp. PRC11] diamond 249 80.9 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Acidovorax Acidovorax sp. PRC11
25568992 25568992 PRJNA737474b_S_NODE_32305_length_284_cov_275.810427_g31266_i0 PRJNA737474 32305 284 275.810427 783.30161268 Bosea sp. UNC4 1510531 Bacteria Bacteria 95.5 1.9e-21   NR WP_051988198.1 1510531 g31266 i0 90.2 0.538732394366197 51 5 53.9 0 271 119 205 255 WP_051988198.1 phage terminase large subunit [Bosea sp. UNC402CLCol] diamond 153 95.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. UNC402CLCol
25569016 25569016 PRJNA737474b_S_NODE_32609_length_283_cov_1.866667_g31570_i0 PRJNA737474 32609 283 1.866667 5.28266761 Achromobacter anxifer 1287737 Bacteria Bacteria 131 9.02e-35   NR WP_175207547.1 1287737 g31570 i0 85.5 0.80565371024735 76 11 80.6 0 46 273 39 114 WP_175207547.1 fimbrial protein [Achromobacter anxifer] diamond 228 131 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Achromobacter Achromobacter anxifer
25569027 25569027 PRJNA737474b_S_NODE_32809_length_282_cov_2.708134_g31770_i0 PRJNA737474 32809 282 2.708134 7.63693788 Curvibacter sp. 1888168 Bacteria Bacteria 123 2.34e-30   NR RUP35660.1 1888168 g31770 i0 84.5 0.75531914893617 71 11 75.5 0 266 54 100 170 RUP35660.1 MAG: EAL domain-containing protein [Curvibacter sp.] diamond 213 123 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Curvibacter Curvibacter sp.
25569045 25569045 PRJNA737474b_S_NODE_33129_length_281_cov_1.677885_g32090_i0 PRJNA737474 33129 281 1.677885 4.71485685 uncultured Bosea sp. 211457 Bacteria Bacteria 134 2.9699999999999993e-34   NR WP_293800004.1 211457 g32090 i0 88 0.886120996441281 83 10 88.6 0 2 250 6702 6784 WP_293800004.1 beta strand repeat-containing protein [uncultured Bosea sp.] diamond 249 134 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea uncultured Bosea sp.
25569091 25569091 PRJNA737474b_S_NODE_33753_length_279_cov_0.975728_g32714_i0 PRJNA737474 33753 279 0.975728 2.72228112 Bosea lupini 1036779 Bacteria Bacteria 125 2.24e-31   NR WP_244543775.1 1036779 g32714 i0 91 0.838709677419355 78 7 83.9 0 1 234 431 508 WP_244543775.1 PAS domain-containing methyl-accepting chemotaxis protein [Bosea lupini] diamond 234 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea lupini
25569106 25569106 PRJNA737474b_S_NODE_33937_length_278_cov_1.497561_g32898_i0 PRJNA737474 33937 278 1.497561 4.16321958 Pseudomonadati 3379134 Bacteria Bacteria 173 1.42e-53   NR WP_201520637.1 571 g32898 i0 93.3 3.88489208633094 90 6 97.1 0 9 278 41 130 WP_201520637.1 serine hydrolase, partial [Klebsiella oxytoca] diamond 1080 173 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella oxytoca
25569129 25569129 PRJNA737474b_S_NODE_34201_length_277_cov_1.549020_g33162_i0 PRJNA737474 34201 277 1.54902 4.2907854 Bacteria 2 Bacteria Bacteria 103 3.1499999999999995e-23   NR MBA4216256.1 2067992 g33162 i0 94.3 1.14801444043321 53 3 57.4 0 226 68 221 273 MBA4216256.1 hypothetical protein [Methylibium sp.] diamond 318 103 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Methylibium Methylibium sp.
25569157 25569157 PRJNA737474b_S_NODE_34633_length_275_cov_3.232673_g33594_i0 PRJNA737474 34633 275 3.232673 8.88985075 Afipia 1033 Bacteria Bacteria 119 6.1599999999999994e-30   NR WP_245258708.1 56946 g33594 i0 100 2.48727272727273 57 0 62.2 0 104 274 153 209 WP_245258708.1 DNA-binding response regulator [Afipia broomeae] diamond 684 119 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25569173 25569173 PRJNA737474b_S_NODE_34969_length_274_cov_1.880597_g33930_i0 PRJNA737474 34969 274 1.880597 5.15283578 Afipia broomeae 56946 Bacteria Bacteria 102 8.31e-24   NR WP_006020421.1 56946 g33930 i0 80.8 0.799270072992701 73 14 79.9 0 221 3 1 73 WP_006020421.1 MBL fold metallo-hydrolase [Afipia broomeae] diamond 219 102 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia broomeae
25569189 25569189 PRJNA737474b_S_NODE_35153_length_273_cov_6.465000_g34114_i0 PRJNA737474 35153 273 6.465 17.64945 Phyllobacterium sp. 1871046 Bacteria Bacteria 177 9.889999999999999e-53   NR MBN9137530.1 1871046 g34114 i0 97.8 0.989010989010989 90 2 98.9 0 4 273 12 101 MBN9137530.1 RIP metalloprotease RseP [Phyllobacterium sp.] diamond 270 177 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp.
25569226 25569226 PRJNA737474b_S_NODE_35593_length_272_cov_1.065327_g34554_i0 PRJNA737474 35593 272 1.065327 2.89768944 unclassified Afipia 2642050 Bacteria Bacteria 157 2.31e-47   NR WP_024921080.1 2642050 g34554 i0 94.1 0.9375 85 5 93.8 0 18 272 12 96 WP_024921080.1 MULTISPECIES: DoxX family protein [unclassified Afipia] diamond 255 157 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia  
25569272 25569272 PRJNA737474b_S_NODE_36369_length_269_cov_1.908163_g35330_i0 PRJNA737474 36369 269 1.908163 5.13295847 Roseateles sp. 1971397 Bacteria Bacteria 107 6.78e-25   NR WP_373715509.1 1971397 g35330 i0 98 0.568773234200744 51 1 56.9 0 2 154 476 526 WP_373715509.1 ABC transporter substrate-binding protein [Roseateles sp.] diamond 153 107 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Roseateles sp.
25569279 25569279 PRJNA737474b_S_NODE_36489_length_269_cov_0.964286_g35450_i0 PRJNA737474 36489 269 0.964286 2.59392934 Bosea sp. (in: a-proteobacteria) 1871050 Bacteria Bacteria 150 1.33e-42   NR WP_291550027.1 1871050 g35450 i0 90.5 0.936802973977695 84 8 93.7 0 17 268 100 183 WP_291550027.1 LysR family transcriptional regulator [Bosea sp. (in: a-proteobacteria)] diamond 252 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Boseaceae Bosea Bosea sp. (in: a-proteobacteria)
25569317 25569317 PRJNA737474b_S_NODE_37049_length_267_cov_1.113402_g36010_i0 PRJNA737474 37049 267 1.113402 2.97278334 Afipia 1033 Bacteria Bacteria 168 3.19e-51   NR HAO43203.1 1871052 g36010 i0 96.6 3 89 3 100 0 1 267 32 120 HAO43203.1 triose-phosphate isomerase [Afipia sp.] diamond 801 168 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Afipia Afipia sp.
25569322 25569322 PRJNA737474b_S_NODE_37097_length_267_cov_0.865979_g36058_i0 PRJNA737474 37097 267 0.865979 2.31216393 Hyphomicrobiales 356 Bacteria Bacteria 117 6.85e-29   NR WP_245282462.1 356 g36058 i0 78.9 0.797752808988764 71 15 79.8 0 218 6 146 216 WP_245282462.1 MULTISPECIES: bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [Hyphomicrobiales] diamond 213 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales      
25569325 25569325 PRJNA737474b_S_NODE_37161_length_266_cov_4.310881_g36122_i0 PRJNA737474 37161 266 4.310881 11.46694346 Herbaspirillum aquaticum 568783 Bacteria Bacteria 127 2.0299999999999993e-34   NR WP_088756980.1 568783 g36122 i0 84.7 0.81203007518797 72 10 80.1 1 247 35 104 175 WP_088756980.1 hypothetical protein [Herbaspirillum aquaticum] diamond 216 127 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Herbaspirillum Herbaspirillum aquaticum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;