RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9645839 9645839 PRJNA734348_P_NODE_136048_length_238_cov_2.896970_g135350_i0 PRJNA734348 136048 238 2.89697 6.8947886 Mitovirus sp. 2587224 Viruses Viruses 78.6 6.78e-15   NR QDH87999.1 2587224 g135350 i0 62.5 2.50840336134454 64 23 80.7 1 47 238 12 74 QDH87999.1 MAG: RNA-dependent RNA polymerase, partial [Mitovirus sp.] diamond 597 78.6 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Mitovirus sp.
12197481 12197481 PRJNA734348_P_NODE_37830_length_318_cov_1.208163_g37134_i0 PRJNA734348 37830 318 1.208163 3.84195834 Leviviridae sp. 2027243 Viruses Viruses 94.4 6.7e-20   NR WNK16400.1 2027243 g37134 i0 51.5 0.971698113207547 103 48 97.2 1 316 8 126 226 WNK16400.1 MAG: putative replicase protein [Leviviridae sp.] diamond 309 94.4 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
29809791 29809791 PRJNA734348_P_NODE_46311_length_296_cov_3.403587_g45614_i0 PRJNA734348 46311 296 3.403587 10.07461752 Mihkrovirus 2842867 Viruses Viruses 80.1 6.9e-17   NR QDH88675.1 2027243 g45614 i0 49.4 1.69256756756757 87 44 88.2 0 2 262 31 117 QDH88675.1 MAG: hypothetical protein H1Bulk304066_000002 [Leviviridae sp.] diamond 501 80.9 0.990111248454882 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;