RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29831238 29831238 PRJNA734348_P_NODE_107011_length_247_cov_1.413793_g106313_i0 PRJNA734348 107011 247 1.413793 3.49206871 Diplonema papillatum 91374 Euglenozoa other_Eukaryota 99 1.1200000000000001e-22   NR KAJ9461876.1 91374 g106313 i0 51.2 2.98785425101215 82 38 99.6 1 247 2 125 204 KAJ9461876.1 Guanine nucleotide-binding protein subunit beta-like protein [Diplonema papillatum] diamond 738 99 1 Eukaryota Discoba   Euglenozoa Diplonemea   Diplonemidae Diplonema Diplonema papillatum
30526348 30526348 PRJNA734348_P_NODE_71833_length_268_cov_1.466667_g71135_i0 PRJNA734348 71833 268 1.466667 3.93066756 Bodo saltans 75058 Euglenozoa other_Eukaryota 133 6.02e-34   NR CUG90367.1 75058 g71135 i0 69.7 0.996268656716418 89 27 99.6 0 267 1 598 686 CUG90367.1 trifunctional enzyme alpha precursor-like protein, putative [Bodo saltans] diamond 267 133 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
32676034 32676034 PRJNA734348_P_NODE_90020_length_252_cov_1.720670_g89322_i0 PRJNA734348 90020 252 1.72067 4.3360884 Bodo saltans 75058 Euglenozoa other_Eukaryota 61.6 9.38e-9   NR CUF26021.1 75058 g89322 i0 38.6 0.988095238095238 83 50 98.8 1 1 249 63 144 CUF26021.1 membrane-associated protein, putative [Bodo saltans] diamond 249 61.6 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;