RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA734348 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8372362 8372362 PRJNA734348_P_NODE_87_length_7152_cov_14.340726_g75_i0 PRJNA734348 87 7152 14.340726 1025.64872352 Pseudomonas phage phi12 161736 Viruses Viruses 1061 0   NR NP_690823.1 161736 g75 i0 79.5 0.270553691275168 645 132 27.1 0 1719 3653 12 656 NP_690823.1 RNA-dependent RNA polymerase P2 [Pseudomonas phage phi12] diamond 1935 1061 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
27463417 27463417 PRJNA734348_P_NODE_39803_length_311_cov_1.294118_g39107_i0 PRJNA734348 39803 311 1.294118 4.02470698 Betacystovirus phi12 3427160 Viruses Viruses 168 4.19e-49   NR 2VHC_A 161736 g39107 i0 92.7 0.92604501607717 96 7 92.6 0 3 290 236 331 2VHC_A Chain A, NTPASE P4 [Pseudomonas phage phi12] diamond 288 168 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
28031682 28031682 PRJNA734348_P_NODE_1445_length_2234_cov_17.841277_g1291_i0 PRJNA734348 1445 2234 17.841277 398.57412818 Pseudomonas phage phi12 161736 Viruses Viruses 261 3.16e-78   NR NP_690829.1 161736 g1291 i0 55.1 0.331692032229185 247 109 32.9 1 1397 2131 1 247 NP_690829.1 muramidase [Pseudomonas phage phi12] diamond 741 261 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
28915368 28915368 PRJNA734348_P_NODE_42948_length_307_cov_1.794872_g42251_i0 PRJNA734348 42948 307 1.794872 5.51025704 Pseudomonas phage phi12 161736 Viruses Viruses 202 3.7300000000000004e-59   NR NP_690823.1 161736 g42251 i0 93.1 0.996742671009772 102 7 99.7 0 2 307 154 255 NP_690823.1 RNA-dependent RNA polymerase P2 [Pseudomonas phage phi12] diamond 306 202 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
29325998 29325998 PRJNA734348_P_NODE_24529_length_396_cov_1.857585_g23834_i0 PRJNA734348 24529 396 1.857585 7.3560366 Pseudomonas phage phi12 161736 Viruses Viruses 253 9.23e-78   NR NP_690825.1 161736 g23834 i0 96.9 0.992424242424242 131 4 99.2 0 394 2 181 311 NP_690825.1 major core structural protein P1 [Pseudomonas phage phi12] diamond 393 253 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
30146939 30146939 PRJNA734348_P_NODE_31212_length_348_cov_1.680000_g30516_i0 PRJNA734348 31212 348 1.68 5.8464 Pseudomonas phage phi12 161736 Viruses Viruses 213 7.49e-63   NR NP_690825.1 161736 g30516 i0 97.4 1 116 3 100 0 1 348 68 183 NP_690825.1 major core structural protein P1 [Pseudomonas phage phi12] diamond 348 213 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Betacystovirus Betacystovirus phi12
31063776 31063776 PRJNA734348_P_NODE_99875_length_249_cov_0.875000_g99177_i0 PRJNA734348 99875 249 0.875 2.17875 Malassezia globosa associated totivirus 1 3048756 Viruses Viruses 166 5.049999999999999e-46   NR CAI9858974.1 3048756 g99177 i0 98.8 0.987951807228916 82 1 98.8 0 3 248 289 370 CAI9858974.1 capsid protein [Malassezia globosa associated totivirus 1] diamond 246 166 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia globosa associated totivirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;