RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_phylum = "Candidatus Nomuraibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27020815 27020815 PRJNA734348_P_NODE_124362_length_243_cov_0.905882_g123664_i0 PRJNA734348 124362 243 0.905882 2.20129326 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 105 2.77e-24   NR MCB9820183.1 2052152 g123664 i0 67.1 0.975308641975309 79 26 97.5 0 238 2 338 416 MCB9820183.1 ABC transporter ATP-binding protein [Candidatus Nomurabacteria bacterium] diamond 237 105 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
31221223 31221223 PRJNA734348_P_NODE_134055_length_241_cov_0.916667_g133357_i0 PRJNA734348 134055 241 0.916667 2.20916747 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 104 5.72e-24   NR MEI6810656.1 2052152 g133357 i0 70.1 3.84647302904564 77 23 95.9 0 231 1 720 796 MEI6810656.1 efflux RND transporter permease subunit [Candidatus Nomurabacteria bacterium] diamond 927 104 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;