RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_phylum = "Candidatus Kueneniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Kueneniibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA734348 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28947480 28947480 PRJNA734348_P_NODE_137328_length_236_cov_2.822086_g136630_i0 PRJNA734348 137328 236 2.822086 6.66012296 Candidatus Kuenenbacteria bacterium CG1 2699743 Bacteria Bacteria 45.4 0.00373   NR PIT89670.1 1974618 g136630 i0 39.7 0.73728813559322 58 34 72.5 1 3 173 208 265 PIT89670.1 MAG: hypothetical protein COU23_02690 [Candidatus Kuenenbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_11] diamond 174 45.4 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_36_11
29515346 29515346 PRJNA734348_P_NODE_145530_length_220_cov_5.306122_g144832_i0 PRJNA734348 145530 220 5.306122 11.6734684 Candidatus Kuenenbacteria bacterium CG11_big_fil_rev_8_21_14_ 2699743 Bacteria Bacteria 72.4 4.03e-14   NR PIR05664.1 1974620 g144832 i0 44.1 2.53636363636364 68 38 92.7 0 204 1 43 110 PIR05664.1 MAG: hypothetical protein COV56_01640 [Candidatus Kuenenbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_37_9] diamond 558 72.4 1 Bacteria Bacteria candidate phyla   Candidatus Kueneniibacteriota         Candidatus Kuenenbacteria bacterium CG11_big_fil_rev_8_21_14_0_20_37_9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;