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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_kingdom = "Methanobacteriati"

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tax_superkingdom 1

tax_kingdom 1

  • Methanobacteriati · 11 ✖

bioproject 1

  • PRJNA734348 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7095829 7095829 PRJNA734348_P_NODE_123686_length_243_cov_0.905882_g122988_i0 PRJNA734348 123686 243 0.905882 2.20129326 Halococcus sp. IIIV-5B 2321230 Archaea Archaea 160 9.37e-46   NR WP_120072993.1 2321230 g122988 i0 98.8 0.987654320987654 80 1 98.8 0 241 2 191 270 WP_120072993.1 translation initiation factor IF-2 subunit gamma [Halococcus sp. IIIV-5B] diamond 240 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp. IIIV-5B
15226107 15226107 PRJNA734348_P_NODE_8732_length_822_cov_2.610147_g8140_i0 PRJNA734348 8732 822 2.610147 21.45540834 Thermococcus henrietii 2016361 Archaea Archaea 487 1.7099999999999995e-159   NR WP_099209949.1 2016361 g8140 i0 98.4 6.45620437956204 251 4 91.6 0 10 762 1059 1309 WP_099209949.1 DNA polymerase domain-containing protein [Thermococcus henrietii] diamond 5307 487 1 Archaea   Methanobacteriati Methanobacteriota Thermococci Thermococcales Thermococcaceae Thermococcus Thermococcus henrietii
27305406 27305406 PRJNA734348_P_NODE_101303_length_249_cov_0.875000_g100605_i0 PRJNA734348 101303 249 0.875 2.17875 Methanoculleus sp. 90427 Archaea Archaea 57 3.67e-7   NR WP_324304098.1 90427 g100605 i0 51.6 3.08433734939759 64 25 69.9 2 175 2 159 222 WP_324304098.1 META domain-containing protein [Methanoculleus sp.] diamond 768 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
28757675 28757675 PRJNA734348_P_NODE_101147_length_249_cov_0.875000_g100449_i0 PRJNA734348 101147 249 0.875 2.17875 Methanobrevibacter sp. 66852 Archaea Archaea 121 6.08e-30   NR MEE0925505.1 66852 g100449 i0 100 1.90361445783133 79 0 95.2 0 239 3 433 511 MEE0925505.1 DUF515 domain-containing protein [Methanobrevibacter sp.] diamond 474 121 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
29020879 29020879 PRJNA734348_P_NODE_87528_length_254_cov_1.701657_g86830_i0 PRJNA734348 87528 254 1.701657 4.32220878 root 1 Root_unresolved Root_unresolved 100 2.01e-22   NR MBN1860909.1 2806419 g86830 i0 54.8 1.98425196850394 84 38 99.2 0 3 254 141 224 MBN1860909.1 carboxypeptidase regulatory-like domain-containing protein [Thermoplasmatota archaeon] diamond 504 100 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
29262732 29262732 PRJNA734348_P_NODE_118309_length_244_cov_2.222222_g117611_i0 PRJNA734348 118309 244 2.222222 5.42222168 Natronorubrum tibetense 63128 Archaea Archaea 44.7 0.00746   NR WP_006089508.1 63128 g117611 i0 54.8 0.516393442622951 42 19 51.6 0 43 168 6 47 WP_006089508.1 universal stress protein [Natronorubrum tibetense] diamond 126 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum tibetense
29389408 29389408 PRJNA734348_P_NODE_131969_length_241_cov_0.916667_g131271_i0 PRJNA734348 131969 241 0.916667 2.20916747 Halococcus sp. 29286 Archaea Archaea 119 3.71e-29   NR HET7322819.1 29286 g131271 i0 95.2 1.56846473029046 63 3 78.4 0 52 240 1 63 HET7322819.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Halococcus sp.] diamond 378 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.
29736334 29736334 PRJNA734348_P_NODE_147550_length_209_cov_4.154412_g146852_i0 PRJNA734348 147550 209 4.154412 8.68272108 Methanobrevibacter sp. 66852 Archaea Archaea 111 3.7400000000000006e-27   NR MBO7692969.1 66852 g146852 i0 76.5 0.976076555023923 68 16 97.6 0 5 208 331 398 MBO7692969.1 hypothetical protein [Methanobrevibacter sp.] diamond 204 111 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter sp.
30842407 30842407 PRJNA734348_P_NODE_134414_length_241_cov_0.869048_g133716_i0 PRJNA734348 134414 241 0.869048 2.09440568 Thermoplasmata archaeon 1906666 Archaea Archaea 51.2 5.51e-6   NR MCK4718806.1 1906666 g133716 i0 42 0.622406639004149 50 29 62.2 0 88 237 1 50 MCK4718806.1 hypothetical protein [Thermoplasmata archaeon] diamond 150 51.2 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon
31042453 31042453 PRJNA734348_P_NODE_79595_length_261_cov_1.430851_g78897_i0 PRJNA734348 79595 261 1.430851 3.73452111 Methanosarcinaceae 2206 Archaea Archaea 98.2 1.98e-24   NR WP_015411633.1 2209 g78897 i0 56.3 3.57471264367816 80 35 92 0 260 21 24 103 WP_015411633.1 nucleotidyltransferase family protein [Methanosarcina mazei] diamond 933 98.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
32707670 32707670 PRJNA734348_P_NODE_59180_length_280_cov_2.222222_g58483_i0 PRJNA734348 59180 280 2.222222 6.2222216 Methanoculleus sp. 90427 Archaea Archaea 56.6 5.76e-8   NR MCK9299361.1 90427 g58483 i0 51.2 0.460714285714286 43 21 46.1 0 2 130 59 101 MCK9299361.1 hypothetical protein [Methanoculleus sp.] diamond 129 56.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;