RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 7 ✖

bioproject 1

  • PRJNA734348 · 7 ✖

analysis 1

  • diamond · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1993354 1993354 PRJNA734348_P_NODE_133382_length_241_cov_0.916667_g132684_i0 PRJNA734348 133382 241 0.916667 2.20916747 Eukaryota 2759 Plants Plants 70.9 3.9e-12   NR GLI67100.1 51714 g132684 i0 52.6 6.82157676348548 78 23 97.1 2 240 7 210 273 GLI67100.1 hypothetical protein VaNZ11_011305, partial [Volvox africanus] diamond 1644 70.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox africanus
28767892 28767892 PRJNA734348_P_NODE_148107_length_206_cov_4.774436_g147409_i0 PRJNA734348 148107 206 4.774436 9.83533816 Chlorellaceae 35461 Plants Plants 48.9 1.54e-4   NR PRW39098.1 3076 g147409 i0 88 2.18446601941748 25 3 36.4 0 76 2 619 643 PRW39098.1 glycerol-3-phosphate dehydrogenase mitochondrial-like isoform A [Chlorella sorokiniana] diamond 450 48.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
28915342 28915342 PRJNA734348_P_NODE_124528_length_243_cov_0.905882_g123830_i0 PRJNA734348 124528 243 0.905882 2.20129326 [Myrmecia] bisecta 41462 Plants Plants 66.2 1.96e-10   NR KAK9815325.1 41462 g123830 i0 46.7 0.740740740740741 60 32 74.1 0 242 63 1123 1182 KAK9815325.1 hypothetical protein WJX72_001813 [[Myrmecia] bisecta] diamond 180 66.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
29736317 29736317 PRJNA734348_P_NODE_116190_length_245_cov_0.895349_g115492_i0 PRJNA734348 116190 245 0.895349 2.19360505 [Myrmecia] bisecta 41462 Plants Plants 57.8 1.84e-7   NR KAK9814278.1 41462 g115492 i0 45.5 0.673469387755102 55 28 66.1 2 164 3 125 178 KAK9814278.1 hypothetical protein WJX72_003319 [[Myrmecia] bisecta] diamond 165 57.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Myrmecia [Myrmecia] bisecta
31632559 31632559 PRJNA734348_P_NODE_105236_length_248_cov_0.880000_g104538_i0 PRJNA734348 105236 248 0.88 2.1824 Chlamydomonas sp. UWO 241 1653778 Plants Plants 62 3.34e-9   NR KAG1656550.1 1653778 g104538 i0 45.8 0.713709677419355 59 32 71.4 0 181 5 84 142 KAG1656550.1 hypothetical protein FOA52_011502 [Chlamydomonas sp. UWO 241] diamond 177 62 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas sp. UWO 241
31948863 31948863 PRJNA734348_P_NODE_125777_length_243_cov_0.905882_g125079_i0 PRJNA734348 125777 243 0.905882 2.20129326 Prototheca wickerhamii 3111 Plants Plants 138 2.56e-36   NR KAK2079342.1 3111 g125079 i0 98.4 0.765432098765432 62 1 76.5 0 242 57 78 139 KAK2079342.1 hypothetical protein QBZ16_003033 [Prototheca wickerhamii] diamond 186 138 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca wickerhamii
32244328 32244328 PRJNA734348_P_NODE_83098_length_258_cov_1.389189_g82400_i0 PRJNA734348 83098 258 1.389189 3.58410762 Trebouxiaceae 2507902 Plants Plants 59.7 3.24e-8   NR KAK9806435.1 706552 g82400 i0 69.2 2.26744186046512 39 12 45.3 0 83 199 178 216 KAK9806435.1 hypothetical protein WJX73_007252 [Symbiochloris irregularis] diamond 585 59.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Symbiochloris Symbiochloris irregularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;