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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_clade = "Stenosarchaea group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 6 ✖

bioproject 1

  • PRJNA734348 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7095829 7095829 PRJNA734348_P_NODE_123686_length_243_cov_0.905882_g122988_i0 PRJNA734348 123686 243 0.905882 2.20129326 Halococcus sp. IIIV-5B 2321230 Archaea Archaea 160 9.37e-46   NR WP_120072993.1 2321230 g122988 i0 98.8 0.987654320987654 80 1 98.8 0 241 2 191 270 WP_120072993.1 translation initiation factor IF-2 subunit gamma [Halococcus sp. IIIV-5B] diamond 240 160 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp. IIIV-5B
27305406 27305406 PRJNA734348_P_NODE_101303_length_249_cov_0.875000_g100605_i0 PRJNA734348 101303 249 0.875 2.17875 Methanoculleus sp. 90427 Archaea Archaea 57 3.67e-7   NR WP_324304098.1 90427 g100605 i0 51.6 3.08433734939759 64 25 69.9 2 175 2 159 222 WP_324304098.1 META domain-containing protein [Methanoculleus sp.] diamond 768 57 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.
29262732 29262732 PRJNA734348_P_NODE_118309_length_244_cov_2.222222_g117611_i0 PRJNA734348 118309 244 2.222222 5.42222168 Natronorubrum tibetense 63128 Archaea Archaea 44.7 0.00746   NR WP_006089508.1 63128 g117611 i0 54.8 0.516393442622951 42 19 51.6 0 43 168 6 47 WP_006089508.1 universal stress protein [Natronorubrum tibetense] diamond 126 44.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natrialbaceae Natronorubrum Natronorubrum tibetense
29389408 29389408 PRJNA734348_P_NODE_131969_length_241_cov_0.916667_g131271_i0 PRJNA734348 131969 241 0.916667 2.20916747 Halococcus sp. 29286 Archaea Archaea 119 3.71e-29   NR HET7322819.1 29286 g131271 i0 95.2 1.56846473029046 63 3 78.4 0 52 240 1 63 HET7322819.1 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein [Halococcus sp.] diamond 378 119 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halococcaceae Halococcus Halococcus sp.
31042453 31042453 PRJNA734348_P_NODE_79595_length_261_cov_1.430851_g78897_i0 PRJNA734348 79595 261 1.430851 3.73452111 Methanosarcinaceae 2206 Archaea Archaea 98.2 1.98e-24   NR WP_015411633.1 2209 g78897 i0 56.3 3.57471264367816 80 35 92 0 260 21 24 103 WP_015411633.1 nucleotidyltransferase family protein [Methanosarcina mazei] diamond 933 98.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanosarcina Methanosarcina mazei
32707670 32707670 PRJNA734348_P_NODE_59180_length_280_cov_2.222222_g58483_i0 PRJNA734348 59180 280 2.222222 6.2222216 Methanoculleus sp. 90427 Archaea Archaea 56.6 5.76e-8   NR MCK9299361.1 90427 g58483 i0 51.2 0.460714285714286 43 21 46.1 0 2 130 59 101 MCK9299361.1 hypothetical protein [Methanoculleus sp.] diamond 129 56.6 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;