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contig_metadata

17 rows where analysis = "diamond", bioproject = "PRJNA734348" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 17 ✖

bioproject 1

  • PRJNA734348 · 17 ✖

analysis 1

  • diamond · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18568505 18568505 PRJNA734348_P_NODE_100155_length_249_cov_0.875000_g99457_i0 PRJNA734348 100155 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 129 1.19e-32   NR PRP81837.1 1890364 g99457 i0 66.3 3.98795180722892 83 28 100 0 249 1 83 165 PRP81837.1 pten, isoform E [Planoprotostelium fungivorum] diamond 993 130 0.992307692307692 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
26704031 26704031 PRJNA734348_P_NODE_66981_length_272_cov_4.241206_g66284_i0 PRJNA734348 66981 272 4.241206 11.53608032 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 48.1 6.9e-4   NR PRP83806.1 1890364 g66284 i0 50 0.551470588235294 50 25 55.1 0 105 254 1060 1109 PRP83806.1 ral GTPase-activating protein subunit alpha-2 [Planoprotostelium fungivorum] diamond 150 48.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27020852 27020852 PRJNA734348_P_NODE_72822_length_267_cov_1.546392_g72124_i0 PRJNA734348 72822 267 1.546392 4.12886664 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 60.1 3.75e-8   NR KYR02690.1 361077 g72124 i0 31.4 0.966292134831461 86 59 96.6 0 8 265 257 342 KYR02690.1 hypothetical protein DLAC_00149 [Tieghemostelium lacteum] diamond 258 60.1 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
27062591 27062591 PRJNA734348_P_NODE_127862_length_242_cov_0.911243_g127164_i0 PRJNA734348 127862 242 0.911243 2.20520806 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 55.1 1.66e-6   NR XP_645258.1 352472 g127164 i0 35.5 1.90909090909091 76 48 93 1 11 235 435 510 XP_645258.1 G-protein-coupled receptor family 3 protein 9 [Dictyostelium discoideum AX4] diamond 462 55.5 0.992792792792793 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
27557776 27557776 PRJNA734348_P_NODE_70564_length_269_cov_1.571429_g69866_i0 PRJNA734348 70564 269 1.571429 4.22714401 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 84.7 8.7e-17   NR PRP85240.1 1890364 g69866 i0 46.4 0.936802973977695 84 44 92.6 1 258 10 84 167 PRP85240.1 p21-activated protein kinase [Planoprotostelium fungivorum] diamond 252 84.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
27852227 27852227 PRJNA734348_P_NODE_137184_length_236_cov_3.570552_g136486_i0 PRJNA734348 137184 236 3.570552 8.42650272 Eumycetozoa 142796 Evosea other_Eukaryota 50.1 8.9e-5   NR KAF2077531.1 133409 g136486 i0 59.5 1.88135593220339 37 15 47 0 124 234 505 541 KAF2077531.1 hypothetical protein CYY_001149 [Polysphondylium violaceum] diamond 444 50.4 0.994047619047619 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
28568273 28568273 PRJNA734348_P_NODE_70927_length_269_cov_1.250000_g70229_i0 PRJNA734348 70927 269 1.25 3.3625 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 73.6 3.11e-13   NR XP_012760194.1 1410327 g70229 i0 44.7 1.77323420074349 76 31 84.8 2 4 231 161 225 XP_012760194.1 hypothetical protein SAMD00019534_038480, partial [Acytostelium subglobosum LB1] diamond 477 73.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
29452091 29452091 PRJNA734348_P_NODE_37510_length_319_cov_1.654472_g36814_i0 PRJNA734348 37510 319 1.654472 5.27776568 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 2.02e-25   NR XP_004348720.1 1257118 g36814 i0 59.3 0.761755485893417 81 33 76.2 0 2 244 48 128 XP_004348720.1 actin binding protein [Acanthamoeba castellanii str. Neff] diamond 243 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29462298 29462298 PRJNA734348_P_NODE_98130_length_250_cov_0.870056_g97432_i0 PRJNA734348 98130 250 0.870056 2.17514 root 1 Root_unresolved Root_unresolved 49.3 1.97e-4   NR KAF2068773.1 133409 g97432 i0 75 0.864 32 8 38.4 0 250 155 99 130 KAF2068773.1 hypothetical protein CYY_009902 [Polysphondylium violaceum] diamond 216 49.7 0.991951710261569 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
29578502 29578502 PRJNA734348_P_NODE_96730_length_250_cov_0.870056_g96032_i0 PRJNA734348 96730 250 0.870056 2.17514 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 70.9 2.7e-12   NR KAH3742840.1 1580589 g96032 i0 66 0.564 47 16 56.4 0 144 4 19 65 KAH3742840.1 protein phosphatase 2C [Pelomyxa schiedti] diamond 141 70.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29768070 29768070 PRJNA734348_P_NODE_89091_length_253_cov_1.450000_g88393_i0 PRJNA734348 89091 253 1.45 3.6685 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 43.9 0.00682   NR KAH3764260.1 1580589 g88393 i0 42 0.592885375494071 50 29 59.3 0 56 205 43 92 KAH3764260.1 hypothetical protein Pelo_3878 [Pelomyxa schiedti] diamond 150 43.9 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
29862877 29862877 PRJNA734348_P_NODE_99631_length_249_cov_0.875000_g98933_i0 PRJNA734348 99631 249 0.875 2.17875 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 66.2 2.11e-10   NR XP_004335867.1 1257118 g98933 i0 48.1 0.975903614457831 81 38 96.4 3 2 241 138 215 XP_004335867.1 guanylyl cyclase [Acanthamoeba castellanii str. Neff] diamond 243 66.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30779120 30779120 PRJNA734348_P_NODE_101654_length_249_cov_0.875000_g100956_i0 PRJNA734348 101654 249 0.875 2.17875 Polysphondylium violaceum 133409 Evosea other_Eukaryota 42.7 0.0387   NR KAF2071425.1 133409 g100956 i0 32.9 0.843373493975904 70 47 84.3 0 214 5 128 197 KAF2071425.1 hypothetical protein CYY_007249, partial [Polysphondylium violaceum] diamond 210 42.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
30820970 30820970 PRJNA734348_P_NODE_48154_length_292_cov_2.369863_g47457_i0 PRJNA734348 48154 292 2.369863 6.91999996 Evosea 2605435 Evosea other_Eukaryota 43.1 0.049   NR XP_020435465.1 670386 g47457 i0 51.4 0.708904109589041 37 18 38 0 174 284 758 794 XP_020435465.1 actin binding protein [Heterostelium album PN500] diamond 207 43.5 0.990804597701149 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
30968892 30968892 PRJNA734348_P_NODE_73554_length_266_cov_2.108808_g72856_i0 PRJNA734348 73554 266 2.108808 5.60942928 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 68.6 4.14e-11   NR PRP73007.1 1890364 g72856 i0 53.1 8.52631578947368 49 23 55.3 0 153 7 1079 1127 PRP73007.1 retrotransposon nucleocapsid protein, partial [Planoprotostelium fungivorum] diamond 2268 68.6 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31664168 31664168 PRJNA734348_P_NODE_40957_length_310_cov_2.898734_g40261_i0 PRJNA734348 40957 310 2.898734 8.9860754 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 64.7 1.44e-9   NR KYQ91515.1 361077 g40261 i0 47.5 1.5 61 31 59 1 183 1 143 202 KYQ91515.1 actin [Tieghemostelium lacteum] diamond 465 64.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32297476 32297476 PRJNA734348_P_NODE_76239_length_264_cov_1.319372_g75541_i0 PRJNA734348 76239 264 1.319372 3.48314208 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 105 5.0599999999999996e-24   NR XP_004335836.1 1257118 g75541 i0 59.5 0.897727272727273 79 28 85.2 1 262 38 36 114 XP_004335836.1 uncharacterized protein ACA1_076760 [Acanthamoeba castellanii str. Neff] diamond 237 105 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;