contig_metadata
6 rows where analysis = "diamond", bioproject = "PRJNA734313" and tax_phylum = "Bacteroidota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28883966 | 28883966 | PRJNA734313_S_NODE_868_length_658_cov_15.122750_g780_i0 | PRJNA734313 | 868 | 658 | 15.12275 | 99.507695 | Chitinophagales bacterium | 2448779 | Bacteria | Bacteria | 47 | 0.0365 | NR | MFI5172965.1 | 2448779 | g780 | i0 | 21.5 | 0.78419452887538 | 172 | 126 | 75.7 | 4 | 541 | 44 | 328 | 496 | MFI5172965.1 RecQ family ATP-dependent DNA helicase [Chitinophagales bacterium] | diamond | 516 | 47 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Chitinophagia | Chitinophagales | Chitinophagales bacterium | |||
| 29304655 | 29304655 | PRJNA734313_S_NODE_37349_length_155_cov_2.240741_g37236_i0 | PRJNA734313 | 37349 | 155 | 2.240741 | 3.47314855 | FCB group | 1783270 | Bacteria | Bacteria | 71.2 | 4.31e-13 | NR | WP_024990718.1 | 77768 | g37236 | i0 | 64.4 | 1.74193548387097 | 45 | 16 | 87.1 | 0 | 1 | 135 | 196 | 240 | WP_024990718.1 glycine rich domain-containing protein [Segatella albensis] | diamond | 270 | 71.6 | 0.994413407821229 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Prevotellaceae | Segatella | Segatella albensis | |
| 29399390 | 29399390 | PRJNA734313_S_NODE_35909_length_158_cov_2.207207_g35796_i0 | PRJNA734313 | 35909 | 158 | 2.207207 | 3.48738706 | Bacteria | 2 | Bacteria | Bacteria | 47 | 3.72e-4 | NR | MBN8827410.1 | 2035813 | g35796 | i0 | 45.1 | 4.51898734177215 | 51 | 28 | 96.8 | 0 | 155 | 3 | 364 | 414 | MBN8827410.1 ankyrin repeat domain-containing protein [Sphingobacteriia bacterium] | diamond | 714 | 47.4 | 0.991561181434599 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Sphingobacteriia | Sphingobacteriia bacterium | ||||
| 29578441 | 29578441 | PRJNA734313_S_NODE_14610_length_246_cov_1.633166_g14497_i0 | PRJNA734313 | 14610 | 246 | 1.633166 | 4.01758836 | Alistipes shahii | 328814 | Bacteria | Bacteria | 64.3 | 8.35e-10 | NR | WP_229104358.1 | 328814 | g14497 | i0 | 50.7 | 0.817073170731707 | 67 | 32 | 81.7 | 1 | 225 | 25 | 179 | 244 | WP_229104358.1 leucine-rich repeat protein, partial [Alistipes shahii] | diamond | 201 | 64.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidales | Rikenellaceae | Alistipes | Alistipes shahii | |
| 30905621 | 30905621 | PRJNA734313_S_NODE_574_length_745_cov_15.302292_g517_i0 | PRJNA734313 | 574 | 745 | 15.302292 | 114.0020754 | Bacteroidota bacterium | 1898104 | Bacteria | Bacteria | 327 | 5.25e-109 | NR | MCX6230815.1 | 1898104 | g517 | i0 | 69.2 | 2.86711409395973 | 237 | 72 | 95.4 | 1 | 3 | 713 | 90 | 325 | MCX6230815.1 adenosine kinase [Bacteroidota bacterium] | diamond | 2136 | 327 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidota bacterium | |||||
| 32075512 | 32075512 | PRJNA734313_S_NODE_23258_length_193_cov_1.397260_g23145_i0 | PRJNA734313 | 23258 | 193 | 1.39726 | 2.6967118 | Bacteroidia bacterium | 2044936 | Bacteria | Bacteria | 44.3 | 0.00556 | NR | MCU0432561.1 | 2044936 | g23145 | i0 | 71.4 | 0.932642487046632 | 28 | 8 | 43.5 | 0 | 178 | 95 | 46 | 73 | MCU0432561.1 ankyrin repeat domain-containing protein [Bacteroidia bacterium] | diamond | 180 | 44.3 | 1 | Bacteria | FCB group | Pseudomonadati | Bacteroidota | Bacteroidia | Bacteroidia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;