RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA734313" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA734313 · 6 ✖

analysis 1

  • diamond · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26619405 26619405 PRJNA734313_S_NODE_29301_length_170_cov_3.357724_g29188_i0 PRJNA734313 29301 170 3.357724 5.7081308 root 1 Root_unresolved Root_unresolved 43.5 0.00759   NR XP_062756889.1 173218 g29188 i0 54.3 1.18235294117647 35 16 61.8 0 7 111 1097 1131 XP_062756889.1 uncharacterized protein Triagg1_4382 [Trichoderma aggressivum f. europaeum] diamond 201 43.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma aggressivum
26650847 26650847 PRJNA734313_S_NODE_6481_length_359_cov_1.839744_g6368_i0 PRJNA734313 6481 359 1.839744 6.60468096 root 1 Root_unresolved Root_unresolved 52.4 6.05e-5   NR KUI67785.1 578113 g6368 i0 42.4 6.5933147632312 59 34 49.3 0 339 163 994 1052 KUI67785.1 Protein MGA2 [Cytospora mali] diamond 2367 52.8 0.992424242424242 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Diaporthales Cytosporaceae Cytospora Cytospora mali
29936360 29936360 PRJNA734313_S_NODE_27811_length_175_cov_2.414062_g27698_i0 PRJNA734313 27811 175 2.414062 4.2246085 Eukaryota 2759 Fungi Fungi 79 2.59e-15   NR QID88496.1 27292 g27698 i0 66.1 3.87428571428571 56 19 96 0 4 171 537 592 QID88496.1 glycyl-tRNA synthase [Saccharomyces pastorianus] diamond 678 79.7 0.991217063989962 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Saccharomyces Saccharomyces pastorianus
29989248 29989248 PRJNA734313_S_NODE_9631_length_303_cov_1.578125_g9518_i0 PRJNA734313 9631 303 1.578125 4.78171875 Dissoconium aciculare CBS 342.82 1314786 Fungi Fungi 110 1.31e-28   NR XP_033454825.1 1314786 g9518 i0 65.6 0.920792079207921 93 32 92.1 0 2 280 28 120 XP_033454825.1 uncharacterized protein K489DRAFT_385514 [Dissoconium aciculare CBS 342.82] diamond 279 110 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Dissoconiaceae Dissoconium Dissoconium aciculare
31885626 31885626 PRJNA734313_S_NODE_7857_length_331_cov_1.257042_g7744_i0 PRJNA734313 7857 331 1.257042 4.16080902 Cercospora kikuchii 84275 Fungi Fungi 165 3.61e-46   NR XP_044652522.1 84275 g7744 i0 88 0.75226586102719 83 10 75.2 0 330 82 409 491 XP_044652522.1 uncharacterized protein CKM354_000146200 [Cercospora kikuchii] diamond 249 165 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Cercospora Cercospora kikuchii
32613172 32613172 PRJNA734313_S_NODE_34640_length_160_cov_1.353982_g34527_i0 PRJNA734313 34640 160 1.353982 2.1663712 Monosporozyma servazzii 27293 Fungi Fungi 54.7 6.57e-7   NR CAL9733221.1 27293 g34527 i0 50 0.975 52 26 97.5 0 158 3 120 171 CAL9733221.1 ras-like protein 2 [Monosporozyma servazzii] diamond 156 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Saccharomycetales Saccharomycetaceae Monosporozyma Monosporozyma servazzii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;