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contig_metadata

60 rows where analysis = "diamond", bioproject = "PRJNA734313" and tax_kingdom = "Pseudomonadati"

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tax_clade 2

tax_superkingdom 1

tax_kingdom 1

  • Pseudomonadati · 60 ✖

bioproject 1

  • PRJNA734313 · 60 ✖

analysis 1

  • diamond · 60 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7574689 7574689 PRJNA734313_S_NODE_8926_length_313_cov_26.657895_g8813_i0 PRJNA734313 8926 313 26.657895 83.43921135 Psychromonas sp. PRT-SC 1884585 Bacteria Bacteria 80.5 1.61e-17   NR KPU83399.1 1527299 g8813 i0 72.1 0.651757188498403 68 19 65.2 0 312 109 4 71 KPU83399.1 hypothetical protein JI57_01495 [Psychromonas sp. PRT-SC03] diamond 204 80.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Psychromonadaceae Psychromonas Psychromonas sp. PRT-SC03
19048557 19048557 PRJNA734313_S_NODE_3775_length_432_cov_14.623377_g3667_i0 PRJNA734313 3775 432 14.623377 63.17298864 Psychromonas sp. PRT-SC 1884585 Bacteria Bacteria 87.4 1.15e-19   NR KPU83399.1 1527299 g3667 i0 75 0.472222222222222 68 17 47.2 0 431 228 4 71 KPU83399.1 hypothetical protein JI57_01495 [Psychromonas sp. PRT-SC03] diamond 204 87.4 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Psychromonadaceae Psychromonas Psychromonas sp. PRT-SC03
21598952 21598952 PRJNA734313_S_NODE_36477_length_158_cov_0.918919_g36364_i0 PRJNA734313 36477 158 0.918919 1.45189202 Sphingomonas 13687 Bacteria Bacteria 97.8 2.66e-22   NR WP_125975351.1 13687 g36364 i0 88.5 16.746835443038 52 6 98.7 0 2 157 119 170 WP_125975351.1 MULTISPECIES: MFS transporter [Sphingomonas] diamond 2646 98.6 0.991886409736308 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas  
25423406 25423406 PRJNA734313_S_NODE_20600_length_205_cov_3.531646_g20487_i0 PRJNA734313 20600 205 3.531646 7.2398743 Candidatus Thiodiazotropha 1913444 Bacteria Bacteria 59.3 2.62e-8   NR MCW4345501.1 1655433 g20487 i0 60 1.46341463414634 50 18 70.2 1 34 177 233 282 MCW4345501.1 hypothetical protein [Candidatus Thiodiazotropha endolucinida] diamond 300 59.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Chromatiales Sedimenticolaceae Candidatus Thiodiazotropha Candidatus Thiodiazotropha endolucinida
26767575 26767575 PRJNA734313_S_NODE_3881_length_428_cov_20.593176_g3773_i0 PRJNA734313 3881 428 20.593176 88.13879328 Pantoea ananatis 553 Bacteria Bacteria 95.5 2.63e-22   NR ASN17868.1 553 g3773 i0 68.4 0.553738317757009 79 25 55.4 0 189 425 8 86 ASN17868.1 hypothetical protein B7764_22120 [Pantoea ananatis] diamond 237 95.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Pantoea ananatis
27062589 27062589 PRJNA734313_S_NODE_30242_length_168_cov_0.917355_g30129_i0 PRJNA734313 30242 168 0.917355 1.5411564 root 1 Root_unresolved Root_unresolved 93.2 3.8e-21   NR WP_270022569.1 287 g30129 i0 82.1 433.982142857143 56 10 100 0 1 168 161 216 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 72909 93.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
27188881 27188881 PRJNA734313_S_NODE_2882_length_470_cov_13.955083_g2774_i0 PRJNA734313 2882 470 13.955083 65.5888901 Bacteria 2 Bacteria Bacteria 56.6 8.19e-8   NR WBW59034.1 562 g2774 i0 78.1 0.651063829787234 32 7 20.4 0 47 142 8 39 WBW59034.1 hypothetical protein [Escherichia coli] diamond 306 56.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
27188882 27188882 PRJNA734313_S_NODE_31622_length_164_cov_36.897436_g31509_i0 PRJNA734313 31622 164 36.897436 60.51179504 root 1 Root_unresolved Root_unresolved 52 6.4e-6   NR WP_270022569.1 287 g31509 i0 49.1 357.75 53 27 97 0 5 163 120 172 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 58671 52 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
27305396 27305396 PRJNA734313_S_NODE_15203_length_241_cov_2.283505_g15090_i0 PRJNA734313 15203 241 2.283505 5.50324705 Pseudomonas syringae group genomosp. 7 251699 Bacteria Bacteria 42 0.0205   NR WP_395587240.1 251699 g15090 i0 47.4 0.946058091286307 76 27 92.1 5 20 241 5 69 WP_395587240.1 hypothetical protein [Pseudomonas syringae group genomosp. 7] diamond 228 42 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae group genomosp. 7
27315666 27315666 PRJNA734313_S_NODE_10583_length_288_cov_40.112033_g10470_i0 PRJNA734313 10583 288 40.112033 115.52265504 root 1 Root_unresolved Root_unresolved 93.6 1.33e-21   NR WP_071218897.1 470 g10470 i0 83 16.5625 53 9 55.2 0 2 160 125 177 WP_071218897.1 APH(3') family aminoglycoside O-phosphotransferase, partial [Acinetobacter baumannii] diamond 4770 93.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
27347272 27347272 PRJNA734313_S_NODE_10663_length_287_cov_18.033333_g10550_i0 PRJNA734313 10663 287 18.033333 51.75566571 Enterobacterales 91347 Bacteria Bacteria 66.6 8.41e-12   NR MQH38242.1 562 g10550 i0 65.9 1.28571428571429 44 15 46 0 92 223 30 73 MQH38242.1 hypothetical protein [Escherichia coli] diamond 369 66.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
27526354 27526354 PRJNA734313_S_NODE_3883_length_428_cov_17.031496_g3775_i0 PRJNA734313 3883 428 17.031496 72.89480288 Pantoea ananatis 553 Bacteria Bacteria 92.8 3e-21   NR ASN17868.1 553 g3775 i0 68.4 0.553738317757009 79 25 55.4 0 189 425 8 86 ASN17868.1 hypothetical protein B7764_22120 [Pantoea ananatis] diamond 237 92.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Pantoea ananatis
27883850 27883850 PRJNA734313_S_NODE_26625_length_179_cov_2.348485_g26512_i0 PRJNA734313 26625 179 2.348485 4.20378815 root 1 Root_unresolved Root_unresolved 100 6.98e-24   NR WP_270022569.1 287 g26512 i0 78 363.888268156425 59 13 98.9 0 2 178 117 175 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 65136 100 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
28347260 28347260 PRJNA734313_S_NODE_31386_length_165_cov_0.864407_g31273_i0 PRJNA734313 31386 165 0.864407 1.42627155 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 45.8 0.00108   NR MBN8532311.1 1913988 g31273 i0 45.8 0.872727272727273 48 26 87.3 0 165 22 364 411 MBN8532311.1 ankyrin repeat domain-containing protein [Alphaproteobacteria bacterium] diamond 144 45.8 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
28483871 28483871 PRJNA734313_S_NODE_7526_length_336_cov_35.698962_g7413_i0 PRJNA734313 7526 336 35.698962 119.94851232 root 1 Root_unresolved Root_unresolved 93.6 2.42e-21   NR WP_071218897.1 470 g7413 i0 83 14.1964285714286 53 9 47.3 0 2 160 125 177 WP_071218897.1 APH(3') family aminoglycoside O-phosphotransferase, partial [Acinetobacter baumannii] diamond 4770 93.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
28578603 28578603 PRJNA734313_S_NODE_21387_length_201_cov_3.389610_g21274_i0 PRJNA734313 21387 201 3.38961 6.8131161 root 1 Root_unresolved Root_unresolved 97.8 1e-22   NR WP_270022569.1 287 g21274 i0 68.2 463.970149253731 66 21 98.5 0 199 2 109 174 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 93258 98.6 0.991886409736308 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
28673314 28673314 PRJNA734313_S_NODE_37607_length_151_cov_2.951923_g37494_i0 PRJNA734313 37607 151 2.951923 4.45740373 Enterobacterales 91347 Bacteria Bacteria 57.8 2.03e-9   NR MDZ9688724.1 562 g37494 i0 73.5 25.3112582781457 49 13 97.4 0 3 149 15 63 MDZ9688724.1 hypothetical protein [Escherichia coli] diamond 3822 57.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
28694816 28694816 PRJNA734313_S_NODE_14307_length_248_cov_35.089552_g14194_i0 PRJNA734313 14307 248 35.089552 87.02208896 Psychromonas sp. PRT-SC 1884585 Bacteria Bacteria 68.2 5.22e-13   NR KPU83399.1 1527299 g14194 i0 68.2 0.798387096774194 66 21 79.8 0 2 199 4 69 KPU83399.1 hypothetical protein JI57_01495 [Psychromonas sp. PRT-SC03] diamond 198 68.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Alteromonadales Psychromonadaceae Psychromonas Psychromonas sp. PRT-SC03
28799313 28799313 PRJNA734313_S_NODE_8387_length_321_cov_71.755474_g8274_i0 PRJNA734313 8387 321 71.755474 230.33507154 root 1 Root_unresolved Root_unresolved 94 1.4200000000000002e-21   NR WP_071218897.1 470 g8274 i0 71.9 16.7476635514019 64 18 59.8 0 2 193 114 177 WP_071218897.1 APH(3') family aminoglycoside O-phosphotransferase, partial [Acinetobacter baumannii] diamond 5376 94 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
28883966 28883966 PRJNA734313_S_NODE_868_length_658_cov_15.122750_g780_i0 PRJNA734313 868 658 15.12275 99.507695 Chitinophagales bacterium 2448779 Bacteria Bacteria 47 0.0365   NR MFI5172965.1 2448779 g780 i0 21.5 0.78419452887538 172 126 75.7 4 541 44 328 496 MFI5172965.1 RecQ family ATP-dependent DNA helicase [Chitinophagales bacterium] diamond 516 47 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales     Chitinophagales bacterium
28894113 28894113 PRJNA734313_S_NODE_15048_length_242_cov_59.507692_g14935_i0 PRJNA734313 15048 242 59.507692 144.00861464 root 1 Root_unresolved Root_unresolved 95.9 9.66e-22   NR WP_270022569.1 287 g14935 i0 60.8 402.148760330579 79 31 97.9 0 2 238 134 212 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 97320 95.9 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
29010746 29010746 PRJNA734313_S_NODE_6428_length_359_cov_24.355769_g6315_i0 PRJNA734313 6428 359 24.355769 87.43721071 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 44.7 0.0289   NR MEN9284001.1 2026799 g6315 i0 48.2 0.467966573816156 56 22 40.9 2 71 217 345 400 MEN9284001.1 Thiamine biosynthesis lipoprotein ApbE precursor [Verrucomicrobiota bacterium] diamond 168 44.7 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
29304655 29304655 PRJNA734313_S_NODE_37349_length_155_cov_2.240741_g37236_i0 PRJNA734313 37349 155 2.240741 3.47314855 FCB group 1783270 Bacteria Bacteria 71.2 4.31e-13   NR WP_024990718.1 77768 g37236 i0 64.4 1.74193548387097 45 16 87.1 0 1 135 196 240 WP_024990718.1 glycine rich domain-containing protein [Segatella albensis] diamond 270 71.6 0.994413407821229 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Segatella Segatella albensis
29304656 29304656 PRJNA734313_S_NODE_8389_length_321_cov_20.193431_g8276_i0 PRJNA734313 8389 321 20.193431 64.82091351 Enterobacterales 91347 Bacteria Bacteria 73.2 3.37e-14   NR MQH38242.1 562 g8276 i0 72.7 0.822429906542056 44 12 41.1 0 230 99 30 73 MQH38242.1 hypothetical protein [Escherichia coli] diamond 264 73.6 0.994565217391304 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
29389391 29389391 PRJNA734313_S_NODE_29049_length_171_cov_2.080645_g28936_i0 PRJNA734313 29049 171 2.080645 3.55790295 Casimicrobiaceae bacterium 2906524 Bacteria Bacteria 40 0.0427   NR MEO8850009.1 2906524 g28936 i0 51.4 0.614035087719298 35 16 61.4 1 165 61 51 84 MEO8850009.1 lactate utilization protein LutB domain-containing protein [Casimicrobiaceae bacterium] diamond 105 40 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria   Casimicrobiaceae   Casimicrobiaceae bacterium
29399390 29399390 PRJNA734313_S_NODE_35909_length_158_cov_2.207207_g35796_i0 PRJNA734313 35909 158 2.207207 3.48738706 Bacteria 2 Bacteria Bacteria 47 3.72e-4   NR MBN8827410.1 2035813 g35796 i0 45.1 4.51898734177215 51 28 96.8 0 155 3 364 414 MBN8827410.1 ankyrin repeat domain-containing protein [Sphingobacteriia bacterium] diamond 714 47.4 0.991561181434599 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia       Sphingobacteriia bacterium
29462287 29462287 PRJNA734313_S_NODE_18630_length_216_cov_4.319527_g18517_i0 PRJNA734313 18630 216 4.319527 9.33017832 Campylobacter 194 Bacteria Bacteria 82.4 7.69e-19   NR WP_338012055.1 196 g18517 i0 65.5 1.56944444444444 58 20 80.6 0 2 175 9 66 WP_338012055.1 pyruvate kinase alpha/beta domain-containing protein, partial [Campylobacter fetus] diamond 339 82.8 0.995169082125604 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter fetus
29557140 29557140 PRJNA734313_S_NODE_3850_length_429_cov_76.623037_g3742_i0 PRJNA734313 3850 429 76.623037 328.71282873 Enterobacteriaceae 543 Bacteria Bacteria 116 1.22e-29   NR WP_277107737.1 562 g3742 i0 62.4 21.6923076923077 141 53 98.6 0 425 3 45 185 WP_277107737.1 aminoglycoside 3'-phosphotransferase, partial [Escherichia coli] diamond 9306 116 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
29578441 29578441 PRJNA734313_S_NODE_14610_length_246_cov_1.633166_g14497_i0 PRJNA734313 14610 246 1.633166 4.01758836 Alistipes shahii 328814 Bacteria Bacteria 64.3 8.35e-10   NR WP_229104358.1 328814 g14497 i0 50.7 0.817073170731707 67 32 81.7 1 225 25 179 244 WP_229104358.1 leucine-rich repeat protein, partial [Alistipes shahii] diamond 201 64.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Rikenellaceae Alistipes Alistipes shahii
29894580 29894580 PRJNA734313_S_NODE_34551_length_160_cov_1.707965_g34438_i0 PRJNA734313 34551 160 1.707965 2.732744 Klebsiella pneumoniae 573 Bacteria Bacteria 45.8 9.68e-5   NR WP_217900948.1 573 g34438 i0 65.4 1.33125 26 9 48.8 0 68 145 1 26 WP_217900948.1 hypothetical protein, partial [Klebsiella pneumoniae] diamond 213 45.8 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
30062482 30062482 PRJNA734313_S_NODE_7471_length_337_cov_70.344828_g7358_i0 PRJNA734313 7471 337 70.344828 237.06207036 root 1 Root_unresolved Root_unresolved 139 1.87e-39   NR WP_071218897.1 470 g7358 i0 69.6 21.7744807121662 102 31 90.8 0 336 31 76 177 WP_071218897.1 APH(3') family aminoglycoside O-phosphotransferase, partial [Acinetobacter baumannii] diamond 7338 140 0.992857142857143 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Acinetobacter Acinetobacter baumannii
30157170 30157170 PRJNA734313_S_NODE_9892_length_298_cov_22.171315_g9779_i0 PRJNA734313 9892 298 22.171315 66.0705187 Enterobacterales 91347 Bacteria Bacteria 68.2 2.42e-12   NR MQH38242.1 562 g9779 i0 65.9 0.885906040268456 44 15 44.3 0 92 223 30 73 MQH38242.1 hypothetical protein [Escherichia coli] diamond 264 68.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
30400421 30400421 PRJNA734313_S_NODE_35953_length_158_cov_1.837838_g35840_i0 PRJNA734313 35953 158 1.837838 2.90378404 Treponema sp. 166 Bacteria Bacteria 50.8 1.56e-5   NR MBP3283131.1 166 g35840 i0 43.5 0.873417721518987 46 26 87.3 0 3 140 136 181 MBP3283131.1 ankyrin repeat domain-containing protein [Treponema sp.] diamond 138 50.8 1 Bacteria   Pseudomonadati Spirochaetota Spirochaetia Spirochaetales Treponemataceae Treponema Treponema sp.
30567848 30567848 PRJNA734313_S_NODE_27453_length_176_cov_11.511628_g27340_i0 PRJNA734313 27453 176 11.511628 20.26046528 root 1 Root_unresolved Root_unresolved 79.7 5.12e-16   NR WP_270022569.1 287 g27340 i0 63.8 449.829545454545 58 21 98.9 0 175 2 123 180 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 79170 80.5 0.990062111801242 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
30621030 30621030 PRJNA734313_S_NODE_27713_length_176_cov_1.186047_g27600_i0 PRJNA734313 27713 176 1.186047 2.08744272 Gemmatimonadota bacterium 2026742 Bacteria Bacteria 41.6 0.0387   NR MEN9817563.1 2026742 g27600 i0 41.3 0.784090909090909 46 27 78.4 0 9 146 173 218 MEN9817563.1 hypothetical protein [Gemmatimonadota bacterium] diamond 138 41.6 1 Bacteria FCB group Pseudomonadati Gemmatimonadota         Gemmatimonadota bacterium
30631185 30631185 PRJNA734313_S_NODE_25013_length_185_cov_13.014493_g24900_i0 PRJNA734313 25013 185 13.014493 24.07681205 root 1 Root_unresolved Root_unresolved 105 1.29e-25   NR WP_270022569.1 287 g24900 i0 78.7 360.064864864865 61 13 98.9 0 183 1 126 186 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 66612 105 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
30694507 30694507 PRJNA734313_S_NODE_18153_length_219_cov_17.883721_g18040_i0 PRJNA734313 18153 219 17.883721 39.16534899 root 1 Root_unresolved Root_unresolved 66.6 2.39e-12   NR KXB23588.1 446 g18040 i0 77.2 7.02739726027397 57 13 78.1 0 218 48 35 91 KXB23588.1 hypothetical protein PtVF66_13895, partial [Legionella pneumophila] diamond 1539 66.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Legionellales Legionellaceae Legionella Legionella pneumophila
30852462 30852462 PRJNA734313_S_NODE_15794_length_236_cov_7.476190_g15681_i0 PRJNA734313 15794 236 7.47619 17.6438084 root 1 Root_unresolved Root_unresolved 91.7 2.35e-21   NR WP_236536977.1 317 g15681 i0 74.7 30.4067796610169 75 19 95.3 0 226 2 41 115 WP_236536977.1 phosphotransferase, partial [Pseudomonas syringae] diamond 7176 91.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae
30852463 30852463 PRJNA734313_S_NODE_19454_length_211_cov_21.554878_g19341_i0 PRJNA734313 19454 211 21.554878 45.48079258 root 1 Root_unresolved Root_unresolved 107 2.44e-26   NR WP_270022569.1 287 g19341 i0 68.1 550.364928909953 69 22 98.1 0 207 1 120 188 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 116127 108 0.990740740740741 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
30905621 30905621 PRJNA734313_S_NODE_574_length_745_cov_15.302292_g517_i0 PRJNA734313 574 745 15.302292 114.0020754 Bacteroidota bacterium 1898104 Bacteria Bacteria 327 5.25e-109   NR MCX6230815.1 1898104 g517 i0 69.2 2.86711409395973 237 72 95.4 1 3 713 90 325 MCX6230815.1 adenosine kinase [Bacteroidota bacterium] diamond 2136 327 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
30968852 30968852 PRJNA734313_S_NODE_9754_length_300_cov_7.928854_g9641_i0 PRJNA734313 9754 300 7.928854 23.786562 Escherichia coli 562 Bacteria Bacteria 86.3 3.67e-19   NR WP_206611694.1 562 g9641 i0 70 1.38 70 21 70 0 91 300 4 73 WP_206611694.1 hypothetical protein, partial [Escherichia coli] diamond 414 86.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
31032122 31032122 PRJNA734313_S_NODE_29275_length_171_cov_0.951613_g29162_i0 PRJNA734313 29275 171 0.951613 1.62725823 Candidatus Midichloriaceae bacterium 2862749 Bacteria Bacteria 43.5 0.00758   NR MDF3047934.1 2862749 g29162 i0 54.8 0.543859649122807 31 14 54.4 0 77 169 1097 1127 MDF3047934.1 hypothetical protein [Candidatus Midichloriaceae bacterium] diamond 93 43.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rickettsiales Candidatus Midichloriaceae   Candidatus Midichloriaceae bacterium
31579757 31579757 PRJNA734313_S_NODE_16676_length_229_cov_19.060440_g16563_i0 PRJNA734313 16676 229 19.06044 43.6484076 Enterobacteriaceae 543 Bacteria Bacteria 40 0.0251   NR WBW59034.1 562 g16563 i0 71.9 0.838427947598253 32 9 41.9 0 201 106 8 39 WBW59034.1 hypothetical protein [Escherichia coli] diamond 192 40 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
31601175 31601175 PRJNA734313_S_NODE_26936_length_178_cov_1.946565_g26823_i0 PRJNA734313 26936 178 1.946565 3.4648857 Helicobacter pylori 210 Bacteria Bacteria 40.4 0.0315   NR GAA8747475.1 210 g26823 i0 51.3 1.8876404494382 39 18 64 1 49 162 14 52 GAA8747475.1 hypothetical protein Kyoto147A_2970 [Helicobacter pylori] diamond 336 40.4 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
31632554 31632554 PRJNA734313_S_NODE_27016_length_178_cov_1.282443_g26903_i0 PRJNA734313 27016 178 1.282443 2.28274854 Klebsiella pneumoniae 573 Bacteria Bacteria 41.2 0.00834   NR WP_416515521.1 573 g26903 i0 66.7 0.556179775280899 33 11 55.6 0 99 1 27 59 WP_416515521.1 hypothetical protein, partial [Klebsiella pneumoniae] diamond 99 41.2 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella pneumoniae
31674343 31674343 PRJNA734313_S_NODE_7197_length_342_cov_12.393220_g7084_i0 PRJNA734313 7197 342 12.39322 42.3848124 Enterobacteriaceae 543 Bacteria Bacteria 53.5 4.14e-7   NR WBW59034.1 562 g7084 i0 75 0.56140350877193 32 8 28.1 0 296 201 8 39 WBW59034.1 hypothetical protein [Escherichia coli] diamond 192 53.5 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
31800809 31800809 PRJNA734313_S_NODE_6677_length_354_cov_1.605863_g6564_i0 PRJNA734313 6677 354 1.605863 5.68475502 root 1 Root_unresolved Root_unresolved 121 1.35e-29   NR WP_024305375.1 196 g6564 i0 58.4 5.38135593220339 101 42 85.6 0 25 327 377 477 WP_024305375.1 pyruvate kinase [Campylobacter fetus] diamond 1905 122 0.991803278688525 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Campylobacteraceae Campylobacter Campylobacter fetus
32022517 32022517 PRJNA734313_S_NODE_21798_length_199_cov_9.453947_g21685_i0 PRJNA734313 21798 199 9.453947 18.81335453 root 1 Root_unresolved Root_unresolved 79.7 6.83e-17   NR WP_236536977.1 317 g21685 i0 68.2 33.8291457286432 66 21 99.5 0 198 1 81 146 WP_236536977.1 phosphotransferase, partial [Pseudomonas syringae] diamond 6732 79.7 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas syringae
32075512 32075512 PRJNA734313_S_NODE_23258_length_193_cov_1.397260_g23145_i0 PRJNA734313 23258 193 1.39726 2.6967118 Bacteroidia bacterium 2044936 Bacteria Bacteria 44.3 0.00556   NR MCU0432561.1 2044936 g23145 i0 71.4 0.932642487046632 28 8 43.5 0 178 95 46 73 MCU0432561.1 ankyrin repeat domain-containing protein [Bacteroidia bacterium] diamond 180 44.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia       Bacteroidia bacterium
32075513 32075513 PRJNA734313_S_NODE_24818_length_186_cov_2.460432_g24705_i0 PRJNA734313 24818 186 2.460432 4.57640352 Helicobacter pylori 210 Bacteria Bacteria 105 7.7199999999999995e-28   NR GAA8683247.1 210 g24705 i0 98.4 0.983870967741935 61 1 98.4 0 2 184 20 80 GAA8683247.1 hypothetical protein Kyoto145A_0510 [Helicobacter pylori] diamond 183 105 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Helicobacteraceae Helicobacter Helicobacter pylori
32234011 32234011 PRJNA734313_S_NODE_19498_length_211_cov_2.176829_g19385_i0 PRJNA734313 19498 211 2.176829 4.59310919 Rhizomicrobium sp. 1978228 Bacteria Bacteria 42.7 0.0239   NR HEX3755953.1 1978228 g19385 i0 40.7 0.838862559241706 59 33 83.9 1 211 35 180 236 HEX3755953.1 hypothetical protein [Rhizomicrobium sp.] diamond 177 42.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Micropepsales Micropepsaceae Rhizomicrobium Rhizomicrobium sp.
32234013 32234013 PRJNA734313_S_NODE_23698_length_191_cov_1.416667_g23585_i0 PRJNA734313 23698 191 1.416667 2.70583397 Arcobacter sp. 1872629 Bacteria Bacteria 97.1 3.58e-22   NR WP_287791059.1 1872629 g23585 i0 69.8 1.90052356020942 63 19 99 0 190 2 254 316 WP_287791059.1 UDP-glucose 4-epimerase GalE [Arcobacter sp.] diamond 363 97.1 1 Bacteria   Pseudomonadati Campylobacterota Epsilonproteobacteria Campylobacterales Arcobacteraceae Arcobacter Arcobacter sp.
32434056 32434056 PRJNA734313_S_NODE_1299_length_588_cov_23.719039_g1201_i0 PRJNA734313 1299 588 23.719039 139.46794932 Enterobacterales 91347 Bacteria Bacteria 77 3.43e-13   NR WP_407242025.1 562 g1201 i0 78 0.627551020408163 41 9 20.9 0 497 375 32 72 WP_407242025.1 class A beta-lactamase [Escherichia coli] diamond 369 77 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32434057 32434057 PRJNA734313_S_NODE_16919_length_227_cov_27.455556_g16806_i0 PRJNA734313 16919 227 27.455556 62.32411212 Enterobacteriaceae 543 Bacteria Bacteria 119 1.54e-32   NR WP_181211204.1 562 g16806 i0 77.3 31.704845814978 75 17 99.1 0 2 226 16 90 WP_181211204.1 APH(3') family aminoglycoside O-phosphotransferase, partial [Escherichia coli] diamond 7197 119 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32455446 32455446 PRJNA734313_S_NODE_18359_length_218_cov_2.087719_g18246_i0 PRJNA734313 18359 218 2.087719 4.55122742 Bdellovibrionales bacterium 2053517 Bacteria Bacteria 45.1 0.00409   NR MDE0118824.1 2053517 g18246 i0 44.3 1.55504587155963 61 30 78.4 3 217 47 70 130 MDE0118824.1 ankyrin repeat domain-containing protein [Bdellovibrionales bacterium] diamond 339 45.1 1 Bacteria   Pseudomonadati Bdellovibrionota Bdellovibrionia Bdellovibrionales     Bdellovibrionales bacterium
32497258 32497258 PRJNA734313_S_NODE_25819_length_182_cov_2.340741_g25706_i0 PRJNA734313 25819 182 2.340741 4.26014862 root 1 Root_unresolved Root_unresolved 93.6 3.21e-21   NR WP_270022569.1 287 g25706 i0 73.3 478.681318681319 60 16 98.9 0 2 181 119 178 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 87120 94.4 0.991525423728813 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa
32717859 32717859 PRJNA734313_S_NODE_1200_length_601_cov_23.333935_g1107_i0 PRJNA734313 1200 601 23.333935 140.23694935 Enterobacterales 91347 Bacteria Bacteria 77 3.88e-13   NR WP_407242025.1 562 g1107 i0 78 0.613976705490849 41 9 20.5 0 92 214 32 72 WP_407242025.1 class A beta-lactamase [Escherichia coli] diamond 369 77 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32780646 32780646 PRJNA734313_S_NODE_1300_length_588_cov_22.637708_g1202_i0 PRJNA734313 1300 588 22.637708 133.10972304 root 1 Root_unresolved Root_unresolved 77 3.43e-13   NR WP_407242025.1 562 g1202 i0 78 1.11224489795918 41 9 20.9 0 92 214 32 72 WP_407242025.1 class A beta-lactamase [Escherichia coli] diamond 654 77.4 0.994832041343669 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Escherichia Escherichia coli
32802020 32802020 PRJNA734313_S_NODE_3880_length_428_cov_22.832021_g3772_i0 PRJNA734313 3880 428 22.832021 97.72104988 Pantoea ananatis 553 Bacteria Bacteria 98.6 1.6299999999999994e-23   NR ASN17868.1 553 g3772 i0 70.9 0.553738317757009 79 23 55.4 0 240 4 8 86 ASN17868.1 hypothetical protein B7764_22120 [Pantoea ananatis] diamond 237 98.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Erwiniaceae Pantoea Pantoea ananatis
32906649 32906649 PRJNA734313_S_NODE_23120_length_193_cov_18.828767_g23007_i0 PRJNA734313 23120 193 18.828767 36.33952031 root 1 Root_unresolved Root_unresolved 95.1 9.85e-22   NR WP_270022569.1 287 g23007 i0 68.8 485.471502590674 64 20 99.5 0 192 1 125 188 WP_270022569.1 hypothetical protein [Pseudomonas aeruginosa] diamond 93696 95.5 0.995811518324607 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas Pseudomonas aeruginosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;