RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA733995" and tax_phylum = "Candidatus Falkowiibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Falkowiibacteriota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA733995 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28410480 28410480 PRJNA733995_P_NODE_10146_length_272_cov_1.407035_g10099_i0 PRJNA733995 10146 272 1.407035 3.8271352 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 46.2 0.00318   NR NCU37267.1 2053554 g10099 i0 34.9 0.948529411764706 86 55 93.8 1 14 268 302 387 NCU37267.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 258 46.2 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
29199948 29199948 PRJNA733995_P_NODE_5789_length_358_cov_0.985965_g5742_i0 PRJNA733995 5789 358 0.985965 3.5297547 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 49.7 4.9e-4   NR NCU37267.1 2053554 g5742 i0 33.9 0.963687150837989 115 67 93 4 353 21 315 424 NCU37267.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 345 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
31664129 31664129 PRJNA733995_P_NODE_7617_length_311_cov_1.613445_g7570_i0 PRJNA733995 7617 311 1.613445 5.01781395 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 75.9 1.97e-13   NR NCU37062.1 2053554 g7570 i0 48.7 17.3922829581994 78 35 74.3 2 1 231 942 1015 NCU37062.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 5409 75.9 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium
32328978 32328978 PRJNA733995_P_NODE_2639_length_553_cov_1.604167_g2592_i0 PRJNA733995 2639 553 1.604167 8.87104351 Candidatus Falkowbacteria bacterium 2053554 Bacteria Bacteria 84 4.18e-15   NR NCU37267.1 2053554 g2592 i0 27.8 0.916817359855335 169 119 91.7 1 513 7 32 197 NCU37267.1 hypothetical protein [Candidatus Falkowbacteria bacterium] diamond 507 84 1 Bacteria Bacteria candidate phyla   Candidatus Falkowiibacteriota         Candidatus Falkowbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;