RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

32 rows where analysis = "diamond", bioproject = "PRJNA733995" and tax_phylum = "Bacteroidota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 32 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA733995 · 32 ✖

analysis 1

  • diamond · 32 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16019116 16019116 PRJNA733995_P_NODE_10673_length_265_cov_2.296875_g10626_i0 PRJNA733995 10673 265 2.296875 6.08671875 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 91.3 2.18e-19   NR MBX9780979.1 1869212 g10626 i0 97.7 0.486792452830189 43 1 48.7 0 135 263 1 43 MBX9780979.1 class I SAM-dependent rRNA methyltransferase [Chitinophagaceae bacterium] diamond 129 91.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
17294649 17294649 PRJNA733995_P_NODE_11454_length_256_cov_2.153005_g11407_i0 PRJNA733995 11454 256 2.153005 5.5116928 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 177 5.1099999999999987e-54   NR MBX9734008.1 1869212 g11407 i0 97.6 2.953125 84 2 98.4 0 254 3 134 217 MBX9734008.1 transketolase family protein [Chitinophagaceae bacterium] diamond 756 177 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
17294722 17294722 PRJNA733995_P_NODE_8734_length_290_cov_2.437788_g8687_i0 PRJNA733995 8734 290 2.437788 7.0695852 Sediminibacterium 504481 Bacteria Bacteria 191 2.1599999999999997e-56   NR MBX9778870.1 1869212 g8687 i0 97.9 15.8896551724138 96 2 99.3 0 1 288 111 206 MBX9778870.1 sigma 54-interacting transcriptional regulator [Chitinophagaceae bacterium] diamond 4608 191 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
22394138 22394138 PRJNA733995_P_NODE_11678_length_253_cov_2.138889_g11631_i0 PRJNA733995 11678 253 2.138889 5.41138917 Sediminibacterium 504481 Bacteria Bacteria 158 4.52e-43   NR WP_026750719.1 1267211 g11631 i0 90.4 1.96837944664032 83 8 98.4 0 3 251 152 234 WP_026750719.1 excinuclease ABC subunit UvrB [Sediminibacterium sp. C3] diamond 498 159 0.993710691823899 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp. C3
23669663 23669663 PRJNA733995_P_NODE_14159_length_226_cov_2.013072_g14112_i0 PRJNA733995 14159 226 2.013072 4.54954272 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 79.3 2.66e-15   NR MBN8854436.1 2044944 g14112 i0 100 0.517699115044248 39 0 51.8 0 224 108 336 374 MBN8854436.1 5-(carboxyamino)imidazole ribonucleotide synthase [Sphingobacteriales bacterium] diamond 117 79.3 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
26672225 26672225 PRJNA733995_P_NODE_9621_length_278_cov_2.780488_g9574_i0 PRJNA733995 9621 278 2.780488 7.72975664 Bacteroidota bacterium 1898104 Bacteria Bacteria 48.5 5e-4   NR MBS1604114.1 1898104 g9574 i0 30 0.971223021582734 90 62 97.1 1 8 277 1 89 MBS1604114.1 glycosyltransferase family 4 protein [Bacteroidota bacterium] diamond 270 48.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
26703985 26703985 PRJNA733995_P_NODE_8741_length_290_cov_2.050691_g8694_i0 PRJNA733995 8741 290 2.050691 5.9470039 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 170 5.4e-49   NR MBN8852101.1 2044944 g8694 i0 100 0.993103448275862 96 0 99.3 0 288 1 284 379 MBN8852101.1 hypothetical protein [Sphingobacteriales bacterium] diamond 288 170 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
26862869 26862869 PRJNA733995_P_NODE_11141_length_260_cov_1.395722_g11094_i0 PRJNA733995 11141 260 1.395722 3.6288772 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 176 1.02e-51   NR MBX9779030.1 1869212 g11094 i0 100 0.992307692307692 86 0 99.2 0 258 1 135 220 MBX9779030.1 galactokinase [Chitinophagaceae bacterium] diamond 258 176 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
27052497 27052497 PRJNA733995_P_NODE_9122_length_285_cov_2.334906_g9075_i0 PRJNA733995 9122 285 2.334906 6.6544821 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 176 3.04e-51   NR MCA6438625.1 1869212 g9075 i0 100 0.957894736842105 91 0 95.8 0 284 12 205 295 MCA6438625.1 MFS transporter [Chitinophagaceae bacterium] diamond 273 176 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
27146760 27146760 PRJNA733995_P_NODE_8742_length_290_cov_1.953917_g8695_i0 PRJNA733995 8742 290 1.953917 5.6663593 Hydrobacter penzbergensis 1235997 Bacteria Bacteria 206 3.47e-65   NR WP_092724233.1 1235997 g8695 i0 96.9 0.993103448275862 96 3 99.3 0 3 290 116 211 WP_092724233.1 aspartyl/asparaginyl beta-hydroxylase domain-containing protein [Hydrobacter penzbergensis] diamond 288 206 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Hydrobacter Hydrobacter penzbergensis
28252468 28252468 PRJNA733995_P_NODE_12206_length_250_cov_0.870056_g12159_i0 PRJNA733995 12206 250 0.870056 2.17514 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 158 5.75e-44   NR MCA6438581.1 1869212 g12159 i0 100 0.996 83 0 99.6 0 2 250 322 404 MCA6438581.1 multicopper oxidase domain-containing protein [Chitinophagaceae bacterium] diamond 249 158 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
28315763 28315763 PRJNA733995_P_NODE_12686_length_247_cov_0.885057_g12639_i0 PRJNA733995 12686 247 0.885057 2.18609079 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 152 1.1e-40   NR MBN8851376.1 2044944 g12639 i0 95.1 0.995951417004049 82 4 99.6 0 2 247 670 751 MBN8851376.1 glycoside hydrolase family 97 catalytic domain-containing protein [Sphingobacteriales bacterium] diamond 246 152 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
28726146 28726146 PRJNA733995_P_NODE_12247_length_249_cov_1.750000_g12200_i0 PRJNA733995 12247 249 1.75 4.3575 Sediminibacterium sp. 1917865 Bacteria Bacteria 165 4.7999999999999994e-48   NR MBR2649539.1 1917865 g12200 i0 98.8 0.987951807228916 82 1 98.8 0 2 247 186 267 MBR2649539.1 PorP/SprF family type IX secretion system membrane protein [Sediminibacterium sp.] diamond 246 165 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp.
28820547 28820547 PRJNA733995_P_NODE_10148_length_272_cov_1.366834_g10101_i0 PRJNA733995 10148 272 1.366834 3.71778848 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 181 3.84e-51   NR MCA6441265.1 1869212 g10101 i0 100 1.98529411764706 90 0 99.3 0 271 2 534 623 MCA6441265.1 polyribonucleotide nucleotidyltransferase [Chitinophagaceae bacterium] diamond 540 181 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
29294468 29294468 PRJNA733995_P_NODE_10369_length_269_cov_1.571429_g10322_i0 PRJNA733995 10369 269 1.571429 4.22714401 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 185 1.21e-53   NR MCA6438671.1 1869212 g10322 i0 100 0.992565055762082 89 0 99.3 0 268 2 418 506 MCA6438671.1 hypothetical protein [Chitinophagaceae bacterium] diamond 267 185 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
29420593 29420593 PRJNA733995_P_NODE_11209_length_259_cov_1.655914_g11162_i0 PRJNA733995 11209 259 1.655914 4.28881726 Puia sp. 2045100 Bacteria Bacteria 110 8.83e-27   NR HEY4208996.1 2045100 g11162 i0 75.6 0.903474903474903 78 19 90.3 0 236 3 8 85 HEY4208996.1 RluA family pseudouridine synthase [Puia sp.] diamond 234 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Puia Puia sp.
29452009 29452009 PRJNA733995_P_NODE_10450_length_268_cov_1.579487_g10403_i0 PRJNA733995 10450 268 1.579487 4.23302516 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 184 1.28e-57   NR MCA6446209.1 1869212 g10403 i0 100 1.97014925373134 88 0 98.5 0 266 3 39 126 MCA6446209.1 C40 family peptidase [Chitinophagaceae bacterium] diamond 528 184 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
30115493 30115493 PRJNA733995_P_NODE_8232_length_299_cov_3.663717_g8185_i0 PRJNA733995 8232 299 3.663717 10.95451383 Asinibacterium sp. OR53 925409 Bacteria Bacteria 97.1 6.22e-21   NR WP_037360635.1 925409 g8185 i0 88.9 1.08361204013378 54 6 54.2 0 1 162 136 189 WP_037360635.1 TAT-variant-translocated molybdopterin oxidoreductase [Asinibacterium sp. OR53] diamond 324 97.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Asinibacterium Asinibacterium sp. OR53
30368791 30368791 PRJNA733995_P_NODE_9092_length_286_cov_1.446009_g9045_i0 PRJNA733995 9092 286 1.446009 4.13558574 Puia sp. 2045100 Bacteria Bacteria 144 9.29e-38   NR HVU53433.1 2045100 g9045 i0 80 0.996503496503496 95 19 99.7 0 285 1 441 535 HVU53433.1 hypothetical protein [Puia sp.] diamond 285 144 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Puia Puia sp.
31157885 31157885 PRJNA733995_P_NODE_8735_length_290_cov_2.290323_g8688_i0 PRJNA733995 8735 290 2.290323 6.6419367 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 176 4.61e-49   NR MBX9778911.1 1869212 g8688 i0 92.7 0.993103448275862 96 7 99.3 0 2 289 215 310 MBX9778911.1 prolyl oligopeptidase family serine peptidase [Chitinophagaceae bacterium] diamond 288 176 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31189446 31189446 PRJNA733995_P_NODE_10515_length_267_cov_2.974227_g10468_i0 PRJNA733995 10515 267 2.974227 7.94118609 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 163 2.38e-46   NR TAH02803.1 2044944 g10468 i0 94.3 0.98876404494382 88 5 98.9 0 266 3 170 257 TAH02803.1 MAG: phosphoribosylamine--glycine ligase [Sphingobacteriales bacterium] diamond 264 163 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
31253041 31253041 PRJNA733995_P_NODE_10155_length_272_cov_1.246231_g10108_i0 PRJNA733995 10155 272 1.246231 3.38974832 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 191 1.05e-59   NR MCA6439667.1 1869212 g10108 i0 98.9 1.98529411764706 90 1 99.3 0 272 3 115 204 MCA6439667.1 hypothetical protein [Chitinophagaceae bacterium] diamond 540 191 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31316341 31316341 PRJNA733995_P_NODE_8855_length_289_cov_1.425926_g8808_i0 PRJNA733995 8855 289 1.425926 4.12092614 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 126 4.8799999999999996e-32   NR MCA6440442.1 1869212 g8808 i0 100 1.24567474048443 60 0 62.3 0 3 182 411 470 MCA6440442.1 hypothetical protein [Chitinophagaceae bacterium] diamond 360 126 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31569622 31569622 PRJNA733995_P_NODE_9296_length_283_cov_1.404762_g9249_i0 PRJNA733995 9296 283 1.404762 3.97547646 Sediminibacterium sp. 1917865 Bacteria Bacteria 172 2.66e-52   NR TSA58597.1 1917865 g9249 i0 88.3 5.97879858657244 94 11 99.6 0 2 283 80 173 TSA58597.1 MAG: hypothetical protein D4R41_04245 [Sediminibacterium sp.] diamond 1692 172 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Sediminibacterium Sediminibacterium sp.
31727376 31727376 PRJNA733995_P_NODE_11137_length_260_cov_1.454545_g11090_i0 PRJNA733995 11137 260 1.454545 3.781817 Sphingobacteriales bacterium 2044944 Bacteria Bacteria 168 4.59e-50   NR MBN8850337.1 2044944 g11090 i0 98.8 0.923076923076923 80 1 92.3 0 2 241 195 274 MBN8850337.1 phytanoyl-CoA dioxygenase family protein [Sphingobacteriales bacterium] diamond 240 168 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales     Sphingobacteriales bacterium
31790575 31790575 PRJNA733995_P_NODE_8837_length_289_cov_1.675926_g8790_i0 PRJNA733995 8837 289 1.675926 4.84342614 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 211 3.82e-64   NR MCA6440431.1 1869212 g8790 i0 100 1.99307958477509 96 0 99.7 0 289 2 10 105 MCA6440431.1 hypothetical protein [Chitinophagaceae bacterium] diamond 576 211 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
31822255 31822255 PRJNA733995_P_NODE_9837_length_276_cov_1.192118_g9790_i0 PRJNA733995 9837 276 1.192118 3.29024568 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 110 6.82e-29   NR MCA6440014.1 1869212 g9790 i0 98 2.1304347826087 49 1 53.3 0 1 147 67 115 MCA6440014.1 iron-sulfur cluster assembly accessory protein [Chitinophagaceae bacterium] diamond 588 110 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
32233978 32233978 PRJNA733995_P_NODE_10278_length_270_cov_1.563452_g10231_i0 PRJNA733995 10278 270 1.563452 4.2213204 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 104 8.32e-24   NR MCA6439071.1 1869212 g10231 i0 100 0.544444444444444 49 0 54.4 0 123 269 1 49 MCA6439071.1 PKD domain-containing protein [Chitinophagaceae bacterium] diamond 147 104 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium
32328972 32328972 PRJNA733995_P_NODE_12999_length_245_cov_2.424419_g12952_i0 PRJNA733995 12999 245 2.424419 5.93982655 Bacteroidota bacterium 1898104 Bacteria Bacteria 43.5 0.0202   NR MEY4629151.1 1898104 g12952 i0 71.4 0.673469387755102 28 8 34.3 0 89 6 27 54 MEY4629151.1 hypothetical protein [Bacteroidota bacterium] diamond 165 43.5 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32613143 32613143 PRJNA733995_P_NODE_12820_length_246_cov_1.780347_g12773_i0 PRJNA733995 12820 246 1.780347 4.37965362 Bacteroidota bacterium 1898104 Bacteria Bacteria 143 7.76e-39   NR MEN9598359.1 1898104 g12773 i0 85.2 1.97560975609756 81 12 98.8 0 245 3 86 166 MEN9598359.1 hypothetical protein [Bacteroidota bacterium] diamond 486 143 1 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32717858 32717858 PRJNA733995_P_NODE_6180_length_345_cov_1.132353_g6133_i0 PRJNA733995 6180 345 1.132353 3.90661785 Pseudomonadati 3379134 Bacteria Bacteria 128 7.249999999999999e-32   NR MEM1044139.1 1898104 g6133 i0 68.1 7.18260869565217 91 29 79.1 0 275 3 5 95 MEM1044139.1 aminotransferase class V-fold PLP-dependent enzyme [Bacteroidota bacterium] diamond 2478 129 0.992248062015504 Bacteria FCB group Pseudomonadati Bacteroidota         Bacteroidota bacterium
32865026 32865026 PRJNA733995_P_NODE_11620_length_254_cov_1.701657_g11573_i0 PRJNA733995 11620 254 1.701657 4.32220878 Chitinophagaceae bacterium 1869212 Bacteria Bacteria 93.6 1.89e-21   NR MCA6438520.1 1869212 g11573 i0 100 0.531496062992126 45 0 53.1 0 118 252 1 45 MCA6438520.1 hypothetical protein [Chitinophagaceae bacterium] diamond 135 93.6 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   Chitinophagaceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;