RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA728642" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 4 ✖

tax_phylum 1

tax_kingdom 1

bioproject 1

  • PRJNA728642 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26650835 26650835 PRJNA728642_P_NODE_16781_length_248_cov_1.760000_g16510_i0 PRJNA728642 16781 248 1.76 4.3648 Viruses 10239 Viruses Viruses 88.2 4.09e-18   NR DAR35197.1 38018 g16510 i0 69.4 1.5 62 19 75 0 62 247 746 807 DAR35197.1 MAG TPA: dependent RNA polymerase, partial [Bacteriophage sp.] diamond 372 88.2 1 Viruses               Bacteriophage sp.
26830882 26830882 PRJNA728642_P_NODE_14681_length_262_cov_1.222222_g14410_i0 PRJNA728642 14681 262 1.222222 3.20222164 Caudoviricetes sp. 2832643 Viruses Viruses 88.2 2.67e-18   NR XOR16625.1 2832643 g14410 i0 51.9 1.80916030534351 79 38 90.5 0 241 5 61 139 XOR16625.1 MAG: RNaseH ribonuclease [Caudoviricetes sp.] diamond 474 88.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30031088 30031088 PRJNA728642_P_NODE_16351_length_250_cov_0.870056_g16080_i0 PRJNA728642 16351 250 0.870056 2.17514 Viruses 10239 Viruses Viruses 131 8.02e-36   NR AWD93218.1 2163899 g16080 i0 73.5 1.98 83 22 99.6 0 1 249 93 175 AWD93218.1 PhoH-like protein [Acinetobacter phage vB_AbaM_B9] diamond 495 131 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Acinetobacter phage vB_AbaM_B9
32833490 32833490 PRJNA728642_P_NODE_9580_length_328_cov_6.678431_g9309_i0 PRJNA728642 9580 328 6.678431 21.90525368 Pseudomonas phage Touem 3138548 Viruses Viruses 87.8 2.31e-20   NR XAI70655.1 3138548 g9309 i0 60.3 0.576219512195122 63 25 57.6 0 243 55 1 63 XAI70655.1 hypothetical protein Touem01_00126 [Pseudomonas phage Touem01] diamond 189 87.8 1 Viruses               Pseudomonas phage Touem01

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;